Denali Therapeutics Inc.

United States of America

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New (last 4 weeks) 1
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IPC Class
C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants 61
A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia 41
C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links 37
C07D 413/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings 27
C07D 498/04 - Ortho-condensed systems 27
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05 - Pharmaceutical, veterinary and sanitary products 10
42 - Scientific, technological and industrial services, research and design 6
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1.

POLYPEPTIDE ENGINEERING, LIBRARIES, AND ENGINEERED CD98 HEAVY CHAIN AND TRANSFERRIN RECEPTOR BINDING POLYPEPTIDES

      
Document Number 03242959
Status Pending
Filing Date 2022-12-16
Open to Public Date 2025-02-26
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Akkapeddi, Padma
  • Cherf, Gerald Maxwell
  • Chew, Kylie S.
  • Dennis, Mark S.
  • Gu, Zhenyu
  • Kariolis, Mihalis S.
  • Tran, Hai L.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

The present dislcosure includes engineering methods and polypeptide libraries that are useful for introducing non-native binding sites into polypeptides. Also provided herein are polypeptides that bind to a CD98hc or transferrin receptor (TfR) protein, methods of generating such polypeptides, and methods of using the polypeptides to target a composition across the blood-brain barrier or to a CD98hc-expressing or TfR-expressing cell.

IPC Classes  ?

  • A61P 25/00 - Drugs for disorders of the nervous system
  • C07K 14/79 - Transferrins, e.g. lactoferrins, ovotransferrins
  • C07K 16/00 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 15/10 - Processes for the isolation, preparation or purification of DNA or RNA
  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids

2.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number 18744133
Status Pending
Filing Date 2024-06-14
First Publication Date 2025-01-30
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Lyssikatos, Joseph P.
  • Sweeney, Zachary K.

Abstract

The present disclosure relates generally to LRRK2 inhibitors, or a pharmaceutically acceptable salt, deuterated analog, prodrug, tautomer, stereoisomer, or mixture of stereoisomers thereof, and methods of making and using thereof.

IPC Classes  ?

  • C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07B 59/00 - Introduction of isotopes of elements into organic compounds
  • C07D 401/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing three or more hetero rings
  • C07D 403/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07D 405/14 - Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing three or more hetero rings
  • C07D 409/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 413/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 417/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07D 487/04 - Ortho-condensed systems
  • C07D 491/20 - Spiro-condensed systems
  • C07D 498/04 - Ortho-condensed systems

3.

FORMULATION, SOLID DOSAGE FORM, AND METHODS

      
Application Number US2024038866
Publication Number 2025/019827
Status In Force
Filing Date 2024-07-19
Publication Date 2025-01-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Cohen, Isaac V.
  • Dhuria, Shyeilla V.
  • Fanok, Melania H.
  • Hale, Christopher R. H.
  • Mohammad, Abdul Khader
  • Ran, Yingqing
  • Sudhakar, Anantha
  • Wong, Harvey
  • Yulyaningsih, Ernie

Abstract

The present disclosure relates generally to a granule formulation comprising a eukaryotic initiation factor 2B (eIF2B) modulator, and its use as therapeutic agent, for example, in treating diseases mediated thereby such as Alzheimer's, Parkinson's, ALS, frontotemporal dementia, and cancer.

IPC Classes  ?

4.

METHODS FOR THE TREATMENT OF HUNTER SYNDROME

      
Application Number 18290585
Status Pending
Filing Date 2022-07-22
First Publication Date 2025-01-16
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Arguello, Annie
  • Bhalla, Akhil
  • Harris, Jeffrey Mark
  • Troyer, Matthew D.

Abstract

Certain embodiments provide a method of providing added peripheral IDS activity to a subject with Hunter syndrome, comprising administering to the subject a therapeutically effective dose of a pharmaceutical composition comprising a protein comprising an IDS amino acid sequence and a TfR binding domain. The added peripheral IDS activity can be measured by comparing levels of keratan sulfate (KS) in the subject after administration of the pharmaceutical composition relative to a baseline level. Certain embodiments also provide methods of providing a clinical benefit to a subject with Hunter syndrome and improving treatment in a patient having non-neuronopathic Hunter syndrome, as well as methods and treatment regimens for resolving infusion related reactions (IRRs).

IPC Classes  ?

  • A61K 38/46 - Hydrolases (3)
  • A61K 38/17 - Peptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from animalsPeptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from humans
  • A61P 3/00 - Drugs for disorders of the metabolism
  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids

5.

Kinase Inhibitors and Uses Thereof

      
Application Number 18889058
Status Pending
Filing Date 2024-09-18
First Publication Date 2025-01-09
Owner Denali Therapeutics Inc. (USA)
Inventor
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Fox, Brian
  • Francini, Cinzia Maria
  • Hale, Christopher R.H.
  • Hu, Cheng
  • Leslie, Colin Philip
  • Osipov, Maksim
  • Serra, Elena
  • Sweeney, Zachary K.
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to compounds and compositions, intermediates, processes for their preparation, and their use as kinase inhibitors.

IPC Classes  ?

  • C07D 498/04 - Ortho-condensed systems
  • C07D 223/16 - BenzazepinesHydrogenated benzazepines
  • C07D 267/04 - Seven-membered rings having the hetero atoms in positions 1 and 2
  • C07D 267/14 - Seven-membered rings having the hetero atoms in positions 1 and 4 condensed with carbocyclic rings or ring systems condensed with one six-membered ring
  • C07D 413/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 519/00 - Heterocyclic compounds containing more than one system of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring system not provided for in groups or

6.

VIMLAYAH

      
Application Number 019125510
Status Pending
Filing Date 2024-12-30
Owner Denali Therapeutics Inc. (USA)
NICE Classes  ? 05 - Pharmaceutical, veterinary and sanitary products

Goods & Services

Pharmaceuticals; pharmaceutical preparations for diagnosing and treating neurodegenerative diseases; medical preparations; medicinal preparations and substances; pharmaceutical preparations and substances; pharmaceutical preparations and medical preparations for the treatment, prevention and diagnosis of Alzheimer's disease, Parkinson's disease and other neurodegenerative diseases and disorders of the central nervous system; diagnostic preparations and materials; medical therapeutic agents; pharmaceuticals and medicines for the treatment and prevention of neurological disorders; pharmaceuticals and medicines for the treatment and prevention of strokes, epilepsy and neurodegenerative diseases such as Alzheimer's; biological preparations for the treatment of neurodegenerative diseases; pharmaceutical preparations for the treatment of lysosomal storage diseases; pharmaceutical preparations, namely, a drug delivery system comprising genetically engineered or purified exosomes for therapeutic use; pharmaceutical preparations, namely, exosomes to deliver protein or nucleic acids or viral vectors for therapy; medicine; medical preparations and articles; biological preparations for medical purposes; biological preparations for the treatment of cancer, diabetes, obesity, metabolic syndrome, dementia, and other aging associated pathologies such as mitochondrial disease, joint/ligament strain/tears, muscle atrophy, muscular dystrophy, neuromuscular diseases, neurological disorders, neurodegenerative disorders, inflammatory disorders, infectious diseases, genetic diseases, rare diseases, in-born errors of metabolism (IEMs), lysosomal storage disorders and urea cycle disorders; biological preparations comprising exosome; biological preparations comprising a therapeutic target protein-loaded, nucleic acid-loaded or virus-loaded exosome; biological preparations comprising exosome for use in the manufacture of pharmaceuticals; biological reagents for medical use; mixed biological preparations for medical purposes; mixed biological preparations for the prevention and treatment of infectious diseases; diagnostic reagents used in the fields of biological, genetic engineering and pharmaceutical research; diagnostic reagents comprising exosome used in the fields of biological, genetic engineering and pharmaceutical research; pharmaceuticals, medicines, biologics, biotherapeutics, biosimilars and therapeutics, namely, EV-based nucleic acid therapeutics for the prevention and treatment of infections or disease; diagnostic kits comprised of medical diagnostic reagents and assays for testing of bodily fluids for use in disease detection; diagnostic kits comprised of medical diagnostic reagents and assays for testing of exosomes for use in disease detection; Diagnostic kits comprised of medical diagnostic reagents and assays that test for the presence of cancer, diabetes, obesity, metabolic syndrome, dementia; diagnostic kits comprised of medical diagnostic reagents and assays that test for the presence of other aging associated pathologies such as mitochondrial disease, joint/ligament strain/tears, muscle atrophy, muscular dystrophy, neuromuscular diseases, neurological disorders, neurodegenerative disorders, inflammatory disorders, infectious diseases, genetic diseases, rare diseases, in-born errors of metabolism (IEMs), lysosomal storage disorders and urea cycle disorders..

7.

ANTI-PILRA ANTIBODIES, USES THEREOF, AND RELATED METHODS AND REAGENTS

      
Application Number US2024034973
Publication Number 2024/263884
Status In Force
Filing Date 2024-06-21
Publication Date 2024-12-26
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Kim, Do Jin
  • Misker, Hiwot Girma
  • Monroe, Kathryn M.
  • Pastukova, Cinthia Verónica
  • Sabelstrӧm, Hanna
  • Théolis, Jr., Richard
  • Weerakkody, Tanya N.
  • Xia, Dan

Abstract

e.g.,e.g., monkeys) without the need to rely on a surrogate molecule and also when treating subjects with either PILRA variant. Further described herein, for the first time, are biological discoveries related to PILRA and the effects of reducing PILRA signaling in cells.

IPC Classes  ?

  • C07K 16/24 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against cytokines, lymphokines or interferons
  • A61K 39/395 - AntibodiesImmunoglobulinsImmune serum, e.g. antilymphocytic serum

8.

DUAL TRANSPORTERS AND METHODS OF USE

      
Application Number US2024034457
Publication Number 2024/263558
Status In Force
Filing Date 2024-06-18
Publication Date 2024-12-26
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Akkapeddi, Padma
  • Chan, Darren
  • Cherf, Gerald Maxwell
  • Chew, Kylie S.
  • Dennis, Mark S.
  • Kariolis, Mihalis S.
  • Moshkforoush, Arash
  • Thorne, Robert G.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Described are dual transporters and methods of making and using the dual transporters. The dual transporters bind to a blood brain barrier transport protein and a second protein that is expressed on the luminal surface of the blood brain barrier or is a brain retention protein. The dual transporters improve delivery to the central nervous system.

IPC Classes  ?

  • C07K 14/79 - Transferrins, e.g. lactoferrins, ovotransferrins
  • A61K 39/395 - AntibodiesImmunoglobulinsImmune serum, e.g. antilymphocytic serum
  • A61K 47/42 - ProteinsPolypeptidesDegradation products thereofDerivatives thereof, e.g. albumin, gelatin or zein
  • A61P 25/00 - Drugs for disorders of the nervous system
  • C12N 15/62 - DNA sequences coding for fusion proteins
  • C07K 19/00 - Hybrid peptides
  • C12N 15/10 - Processes for the isolation, preparation or purification of DNA or RNA
  • C12N 15/13 - Immunoglobulins
  • C12N 15/63 - Introduction of foreign genetic material using vectorsVectorsUse of hosts thereforRegulation of expression
  • C40B 40/08 - Libraries containing RNA or DNA which encodes proteins, e.g. gene libraries
  • C40B 40/10 - Libraries containing peptides or polypeptides, or derivatives thereof
  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants

9.

COMPOSITIONS AND METHODS FOR MODULATING TAU EXPRESSION

      
Application Number US2024034923
Publication Number 2024/263852
Status In Force
Filing Date 2024-06-21
Publication Date 2024-12-26
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Barker, Scarlett
  • Devos, Sarah L.
  • Thayer, Mai B.
  • Klar, Richard
  • Michel, Sven
  • Jaschinski, Frank
  • Rothkirch, Larissa

Abstract

Provided herein are MAPT antisense oligonucleotides that are capable of modulating the expression of a MAPT target nucleic acid. Also provided herein are methods of use thereof.

IPC Classes  ?

  • C12N 15/11 - DNA or RNA fragmentsModified forms thereof
  • A61K 31/712 - Nucleic acids or oligonucleotides having modified sugars, i.e. other than ribose or 2'-deoxyribose

10.

VIMLAYAH

      
Application Number 237031000
Status Pending
Filing Date 2024-12-20
Owner Denali Therapeutics Inc. (USA)
NICE Classes  ? 05 - Pharmaceutical, veterinary and sanitary products

Goods & Services

(1) Pharmaceutical preparations for diagnosing and treating neurodegenerative diseases; pharmaceutical preparations for the prevention and treatment of lysosomal storage diseases

11.

VIMLAYAH

      
Serial Number 98912354
Status Pending
Filing Date 2024-12-19
Owner Denali Therapeutics Inc. ()
NICE Classes  ?
  • 05 - Pharmaceutical, veterinary and sanitary products
  • 42 - Scientific, technological and industrial services, research and design

Goods & Services

Pharmaceuticals Scientific research, pharmaceutical research, and medical research; technical consultation and product development for investigators and researchers and neurologists in the field of development of pharmaceuticals

12.

MICROGLIAL CELL MORPHOMETRY

      
Application Number 18701573
Status Pending
Filing Date 2022-10-19
First Publication Date 2024-12-19
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Calvert, Meredith
  • Joy, David

Abstract

Methods and systems described herein may allow for the classification of microglial morphology at single cell resolution. Microglial cell states may be determined, and a biological sample from which the microglial cells are obtained may be classified based on the microglial cell states. Classifying microglial cells may involving segmenting microglia cells into soma and processes in immunofluorescence microscopy images. Additionally, a feature bank may be generated. Values of the features in the feature bank may be measured for an image. Cells may be clustered using the values of the features in the feature bank. The cells in a cluster may be compared to a reference cell with a known state and having known morphological properties. The cluster in the cell may then be assigned the same state as a reference cell. The amount of cells having the state may then be used to determine properties of the biological sample.

IPC Classes  ?

  • G06V 20/69 - Microscopic objects, e.g. biological cells or cellular parts
  • G06T 7/00 - Image analysis
  • G06V 10/762 - Arrangements for image or video recognition or understanding using pattern recognition or machine learning using clustering, e.g. of similar faces in social networks
  • G06V 10/774 - Generating sets of training patternsBootstrap methods, e.g. bagging or boosting
  • G06V 10/82 - Arrangements for image or video recognition or understanding using pattern recognition or machine learning using neural networks

13.

CRYSTALLINE FORMS OF (S)-5-BENZYL-N-(5-METHYL-4-OXO-2,3,4,5-TETRAHYDROPYRIDO [3,2-B][1,4]OXAZEPIN-3-YL)-4H-1,2,4-TRIAZOLE-3-CARBOXAMIDE

      
Application Number 18646220
Status Pending
Filing Date 2024-04-25
First Publication Date 2024-11-28
Owner Denali Therapeutics Inc. (USA)
Inventor Sudhakar, Anantha

Abstract

Described herein are crystalline forms of (S)-5-benzyl-N-(5-methyl-4-oxo-2,3,4,5-tetrahydropyrido [3,2-b][1,4]oxazepin-3-yl)-4H-1,2,4-triazole-3-carboxamide, the process of preparing the forms, and pharmaceutical compositions methods of use thereof.

IPC Classes  ?

14.

ENGINEERED ANTI-HER2 BISPECIFIC PROTEINS

      
Application Number 18685583
Status Pending
Filing Date 2022-08-25
First Publication Date 2024-11-28
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bandyopadhyay, Abira
  • Clemens, Allisa Jayne
  • Kim, Do Jin
  • Pizzo, Michelle E.
  • Shan, Lu
  • Théolis, Jr., Richard
  • Tong, Raymond Ka Hang

Abstract

In one aspect, bispecific proteins having the ability to specifically bind to both subdomain II of human HER2 and subdomain IV of human HER2 are provided. In another aspect, methods of treating a cancer or treating brain metastasis of a cancer using a bispecific protein that specifically binds to subdomain II and subdomain IV of human HER2 are provided.

IPC Classes  ?

  • C07K 16/32 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against translation products from oncogenes
  • A61K 39/00 - Medicinal preparations containing antigens or antibodies
  • A61P 35/00 - Antineoplastic agents

15.

METHODS OF INCREASING SIALIC ACID LEVELS IN RECOMBINANT GLYCOSYLATED PROTEINS

      
Application Number US2024025699
Publication Number 2024/220986
Status In Force
Filing Date 2024-04-22
Publication Date 2024-10-24
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Lenser, Melina
  • Ngo, Hanh Giai
  • Nguyen Dang, Anh Thuy
  • Petersen, Allain Erfe
  • Rajendra, Yashas

Abstract

Provided herein are methods of increasing the sialic acid level in a recombinant glycosylated protein, recombinant glycosylated proteins produced by these methods, and methods of treating a subject in need thereof using these recombinant glycosylated proteins.

16.

ABETA-TARGETING PROTEINS AND METHODS OF USE

      
Application Number US2024021179
Publication Number 2024/206161
Status In Force
Filing Date 2024-03-22
Publication Date 2024-10-03
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Gadkar, Kapil, G.
  • Khoury, Nathalie
  • Pizzo, Michelle, E.
  • Zuchero, Joy, Yu

Abstract

Described are Abeta-targeting proteins comprising an Abeta-binding region, a transferrin receptor (TfR)-binding region that specifically binds a TfR with an affinity of about 900 nM to about 10,000 nM, an FcγR-binding region. Also described are method of making the Abeta-targeting proteins and methods of using the Ab eta-targeting proteins to treat neurodegenerative disorders.

IPC Classes  ?

  • C07K 16/18 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • A61K 39/00 - Medicinal preparations containing antigens or antibodies

17.

SOLID FORMS OF 4-(3,3-DIFLUORO-2,2-DIMETHYL-PROPANOYL)-3,5-DIHYDRO-2H-PYRIDO[3,4-F][1,4]OXAZEPINE-9-CARBONITRILE

      
Application Number 18582522
Status Pending
Filing Date 2024-02-20
First Publication Date 2024-09-26
Owner Denali Therapeutics Inc. (USA)
Inventor
  • De Vicente Fidalgo, Javier
  • Fox, Brian M.
  • Hale, Christopher R.H.

Abstract

Described herein are solid forms of 4-(3,3-difluoro-2,2-dimethyl-propanoyl)-3,5-dihydro-2H-pyrido[3,4-f][1,4]oxazepine-9-carbonitrile, the process of preparing the forms, pharmaceutical compositions comprising same, and methods of use thereof.

IPC Classes  ?

18.

OLIGONUCLEOTIDE CONJUGATES TARGETED TO THE TRANSFERRIN RECEPTOR

      
Application Number 18568076
Status Pending
Filing Date 2022-07-01
First Publication Date 2024-09-12
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Barker, Scarlett
  • Dennis, Mark S.
  • Devos, Sarah L.
  • Estrada, Anthony A.
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.
  • Nilewski, Lizanne G.
  • Park, Joshua I.
  • Shan, Lu
  • Thayer, Mai B.
  • Tong, Raymond Ka Hang
  • Tran, Hai L.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are conjugates comprising proteins that bind to a transferrin receptor and oligonucleotides that are capable of modulating the expression of a target gene or sequence, as well as methods of use thereof.

IPC Classes  ?

  • A61K 47/68 - Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additivesTargeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
  • A61K 9/00 - Medicinal preparations characterised by special physical form
  • A61K 39/00 - Medicinal preparations containing antigens or antibodies
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 15/113 - Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides

19.

Methods of engineering transferrin receptor binding polypeptides

      
Application Number 18643692
Grant Number 12162948
Status In Force
Filing Date 2024-04-23
First Publication Date 2024-08-15
Grant Date 2024-12-10
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Chen, Xiaocheng
  • Dennis, Mark S.
  • Kariolis, Mihalis
  • Silverman, Adam P.
  • Srivastava, Ankita
  • Watts, Ryan J.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are polypeptides that bind to a transferrin receptor, methods of generating such polypeptides, and methods of using the polypeptides to target a composition to a transferrin receptor-expressing cell.

IPC Classes  ?

  • C40B 30/04 - Methods of screening libraries by measuring the ability to specifically bind a target molecule, e.g. antibody-antigen binding, receptor-ligand binding
  • C07K 16/00 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 15/10 - Processes for the isolation, preparation or purification of DNA or RNA
  • C40B 20/00 - Methods specially adapted for identifying library members
  • C40B 50/00 - Methods of creating libraries, e.g. combinatorial synthesis

20.

METHODS FOR TREATING AND MONITORING PARKINSON'S DISEASE

      
Application Number 18288734
Status Pending
Filing Date 2022-04-29
First Publication Date 2024-06-27
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Jennings, Danna L.
  • Daryani, Vinay M.
  • Huntwork-Rodriguez, Sarah

Abstract

The present disclosure relates to methods for treating Parkinson's disease in a subject with a compound provided herein, pharmaceutical compositions comprising the compound, as well methods for monitoring subject's response to the treatment.

IPC Classes  ?

  • A61K 31/506 - PyrimidinesHydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
  • A61K 9/00 - Medicinal preparations characterised by special physical form
  • A61K 9/20 - Pills, lozenges or tablets
  • A61K 9/28 - DrageesCoated pills or tablets

21.

METHODS AND COMPOSITIONS RELATED TO ENGINEERED TRANSFERRIN RECEPTOR‑BINDING MOLECULES

      
Application Number US2023084284
Publication Number 2024/130116
Status In Force
Filing Date 2023-12-15
Publication Date 2024-06-20
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Dennis, Mark S.
  • Kariolis, Mihalis S.
  • Lewcock, Joseph W.
  • Monroe, Kathryn M.
  • Pizzo, Michelle E.
  • Sliwkowski, Mark X.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

e.g.,e.g.,e.g.,e.g., a neurodegenerative disease).

IPC Classes  ?

  • C07K 14/79 - Transferrins, e.g. lactoferrins, ovotransferrins
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • A61P 35/00 - Antineoplastic agents
  • C12Q 1/6886 - Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids

22.

CD98 HEAVY CHAIN TRANSGENIC MODELS

      
Application Number US2023084333
Publication Number 2024/130148
Status In Force
Filing Date 2023-12-15
Publication Date 2024-06-20
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Chew, Kylie S.
  • Gauntlett, Jonathan Caleb

Abstract

In some aspects, the present disclosure provides CD98hc polypeptides containing a partially or fully humanized ECD. In other aspects, this disclosure provides transgenic animal models expressing such polypeptides and methods of using the animal models to identify therapeutics that can cross the blood-brain barrier.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants

23.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023084359
Publication Number 2024/130166
Status In Force
Filing Date 2023-12-15
Publication Date 2024-06-20
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Auch, Lydia A.
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • De Vicente Fidalgo, Javier
  • Fox, Brian M.
  • Huffman, Benjamin J.
  • Widen, John C.

Abstract

The present disclosure relates generally to small molecule inhibitors of axonal degeneration, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

24.

PROCESSES AND INTERMEDIATES FOR THE PREPARATION OF A PYRIMIDINE AMINOPYRAZOLE COMPOUND

      
Application Number US2023080675
Publication Number 2024/112746
Status In Force
Filing Date 2023-11-21
Publication Date 2024-05-30
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Brak, Katrien
  • Johnson, Trevor, C.
  • Sudhakar, Anantha
  • Deignan, Jeffrey

Abstract

N22HHNN 4-ethyl-5-(trifluoromethyl)pyrimidine-2,4- diamine and intermediates thereof.

IPC Classes  ?

  • C07D 403/06 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
  • C07D 403/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • A61P 25/16 - Anti-Parkinson drugs

25.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023080330
Publication Number 2024/108147
Status In Force
Filing Date 2023-11-17
Publication Date 2024-05-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Auch, Lydia A.
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Osipov, Maksim
  • Shams, Hengameh
  • Thottumkara, Arun
  • Widen, John C.

Abstract

The present disclosure relates generally to small molecule modulators of ion channels and their use as therapeutic agents.

IPC Classes  ?

  • A61K 31/395 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
  • A61K 31/166 - Amides, e.g. hydroxamic acids having aromatic rings, e.g. colchicine, atenolol, progabide having the carbon atom of a carboxamide group directly attached to the aromatic ring, e.g. procainamide, procarbazine, metoclopramide, labetalol
  • A61K 31/415 - 1,2-Diazoles
  • A61K 31/33 - Heterocyclic compounds

26.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023080338
Publication Number 2024/108155
Status In Force
Filing Date 2023-11-17
Publication Date 2024-05-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Osipov, Maksim
  • Shams, Hengameh
  • Thottumkara, Arun
  • Widen, John C.

Abstract

The present disclosure relates generally to small molecule modulators of ion channels (TMEM-175) and their use as therapeutic agents.

IPC Classes  ?

  • A61K 31/395 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
  • A61K 31/415 - 1,2-Diazoles
  • A61K 31/166 - Amides, e.g. hydroxamic acids having aromatic rings, e.g. colchicine, atenolol, progabide having the carbon atom of a carboxamide group directly attached to the aromatic ring, e.g. procainamide, procarbazine, metoclopramide, labetalol
  • A61K 31/33 - Heterocyclic compounds

27.

PROCESS FOR THE PREPARATION OF PYRIMIDINYL-4-AMINOPYRAZOLE COMPOUNDS

      
Application Number 18384080
Status Pending
Filing Date 2023-10-26
First Publication Date 2024-05-16
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Remarchuk, Travis
  • Sudhakar, Anantha

Abstract

The present disclosure relates to methods of making LRRK2-inhibiting, pyrimidinyl-4-aminopyrazole compounds and intermediates of formulae I and IV: The compounds are useful as LRRK2 inhibitors in the treatment of LRRK2 mediated diseases, and as intermediates for their manufacture. The present disclosure relates to methods of making LRRK2-inhibiting, pyrimidinyl-4-aminopyrazole compounds and intermediates of formulae I and IV: The compounds are useful as LRRK2 inhibitors in the treatment of LRRK2 mediated diseases, and as intermediates for their manufacture.

IPC Classes  ?

  • C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links

28.

SOLID AND CO-CRYSTAL FORMS OF A PYRIMIDINE TRIAZOLE COMPOUND

      
Application Number US2023036758
Publication Number 2024/097394
Status In Force
Filing Date 2023-11-03
Publication Date 2024-05-10
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Brak, Katrien
  • Sudhakar, Anantha

Abstract

The present disclosure relates to crystalline and amorphous forms of N2-(3-(2-(2H-l,2,3-triazol-2-yl)propan-2-yl)-l-cyclopropyl-l//-pyrazol-5- yl)-/V7-ethyl-5-(trifluoromethyl)pyrimidine-2,4-diamine (compound of Formula I), cocrystals, pharmaceutical compositions, and preparations thereof.

IPC Classes  ?

  • C07D 403/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07C 53/122 - Propionic acid
  • C07C 57/02 - Unsaturated compounds having carboxyl groups bound to acyclic carbon atoms with only carbon-to-carbon double bonds as unsaturation
  • C07C 63/04 - Monocyclic monocarboxylic acids

29.

Compounds, Compositions and Methods

      
Application Number 18232435
Status Pending
Filing Date 2023-08-10
First Publication Date 2024-05-09
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Fox, Brian
  • Leslie, Colin Phillip
  • Lyssikatos, Joseph P.
  • Pozzan, Alfonso
  • Sweeney, Zachary K.
  • De Vicente Fidalgo, Javier

Abstract

The present disclosure relates generally to compounds and compositions, and their use as kinase inhibitors.

IPC Classes  ?

  • C07D 513/04 - Ortho-condensed systems
  • C07D 261/18 - Carbon atoms having three bonds to hetero atoms, with at the most one bond to halogen
  • C07D 267/14 - Seven-membered rings having the hetero atoms in positions 1 and 4 condensed with carbocyclic rings or ring systems condensed with one six-membered ring
  • C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 413/12 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 413/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 417/12 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 471/04 - Ortho-condensed systems
  • C07D 487/04 - Ortho-condensed systems
  • C07D 491/048 - Ortho-condensed systems with only one oxygen atom as ring hetero atom in the oxygen-containing ring the oxygen-containing ring being five-membered
  • C07D 495/04 - Ortho-condensed systems
  • C07D 498/04 - Ortho-condensed systems
  • C07D 498/14 - Ortho-condensed systems

30.

ANTI-TRANSFERRIN RECEPTOR FUSION PROTEINS AND METHODS OF USE THEREOF

      
Application Number 18276823
Status Pending
Filing Date 2022-02-11
First Publication Date 2024-05-09
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Arguello, Annie
  • Giese, Tina
  • Kannan, Gunasekaran
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.
  • Wang, Junhua

Abstract

Certain embodiments provide a fusion protein comprising an iduronate 2-sulfatase (IDS) amino acid sequence, an IDS variant amino acid sequence, or a catalytically active fragment thereof; and an anti-transferrin receptor (TfR) antibody as described herein, as well as methods of use thereof.

IPC Classes  ?

  • A61K 39/395 - AntibodiesImmunoglobulinsImmune serum, e.g. antilymphocytic serum
  • A61K 38/46 - Hydrolases (3)
  • A61P 3/00 - Drugs for disorders of the metabolism
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 9/16 - Hydrolases (3.) acting on ester bonds (3.1)

31.

FUSION PROTEINS COMPRISING SULFOGLUCOSAMINE SULFOHYDROLASE ENZYMES AND METHODS THEREOF

      
Application Number 18411592
Status Pending
Filing Date 2024-01-12
First Publication Date 2024-05-09
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Giese, Tina
  • Kannan, Gunasekaran
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.

Abstract

Provided herein are proteins, which are capable of being transported across the blood-brain barrier (BBB) and comprise sulfoglucosamine sulfohydrolase (SGSH) enzyme-Fc fusion polypeptides. Certain embodiments also provide methods of using such proteins to treat Sanfilippo syndrome A.

IPC Classes  ?

32.

METHODS OF ENGINEERING TRANSFERRIN RECEPTOR BINDING POLYPEPTIDES

      
Application Number 18408477
Status Pending
Filing Date 2024-01-09
First Publication Date 2024-05-02
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Chen, Xiaocheng
  • Dennis, Mark S.
  • Kariolis, Mihalis
  • Silverman, Adam P.
  • Srivastava, Ankita
  • Watts, Ryan J.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are polypeptides that bind to a transferrin receptor, methods of generating such polypeptides, and methods of using the polypeptides to target a composition to a transferrin receptor-expressing cell.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C07K 16/00 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies
  • C12N 15/10 - Processes for the isolation, preparation or purification of DNA or RNA
  • C40B 20/00 - Methods specially adapted for identifying library members
  • C40B 30/04 - Methods of screening libraries by measuring the ability to specifically bind a target molecule, e.g. antibody-antigen binding, receptor-ligand binding
  • C40B 50/00 - Methods of creating libraries, e.g. combinatorial synthesis

33.

MODULATORS OF EUKARYOTIC INITIATION FACTOR 2

      
Application Number 18526983
Status Pending
Filing Date 2023-12-01
First Publication Date 2024-05-02
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Craig Ii, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Fox, Brian M.
  • Lexa, Katrina W.
  • Osipov, Maksim
  • Sweeney, Zachary K.
  • Tottumkara, Arun

Abstract

The present disclosure relates generally to eukaryotic initiation factor 2B modulators of formula A, or a pharmaceutically acceptable salt, stereoisomer, or mixture of stereoisomers thereof and methods of making and using thereof. The present disclosure relates generally to eukaryotic initiation factor 2B modulators of formula A, or a pharmaceutically acceptable salt, stereoisomer, or mixture of stereoisomers thereof and methods of making and using thereof.

IPC Classes  ?

  • C07D 271/07 - 1,2,4-OxadiazolesHydrogenated 1,2,4-oxadiazoles with oxygen, sulfur or nitrogen atoms, directly attached to ring carbon atoms, the nitrogen atoms not forming part of a nitro radical
  • C07C 235/22 - Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by oxygen atoms having carbon atoms of carboxamide groups bound to acyclic carbon atoms and singly-bound oxygen atoms bound to the same carbon skeleton the carbon skeleton being acyclic and saturated having at least one of the singly-bound oxygen atoms further bound to a carbon atom of a six-membered aromatic ring, e.g. phenoxyacetamides having the nitrogen atom of at least one of the carboxamide groups bound to a carbon atom of a ring other than a six-membered aromatic ring
  • C07C 255/46 - Carboxylic acid nitriles having cyano groups bound to carbon atoms of rings other than six-membered aromatic rings to carbon atoms of non-condensed rings
  • C07D 205/04 - Heterocyclic compounds containing four-membered rings with one nitrogen atom as the only ring hetero atom not condensed with other rings having no double bonds between ring members or between ring members and non-ring members
  • C07D 205/12 - Heterocyclic compounds containing four-membered rings with one nitrogen atom as the only ring hetero atom condensed with carbocyclic rings or ring systems
  • C07D 209/52 - Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom condensed with one carbocyclic ring condensed with a ring other than six-membered
  • C07D 211/58 - Nitrogen atoms attached in position 4
  • C07D 221/20 - Spiro-condensed ring systems
  • C07D 233/32 - One oxygen atom
  • C07D 401/04 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 413/04 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring- member bond

34.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023076291
Publication Number 2024/077273
Status In Force
Filing Date 2023-10-06
Publication Date 2024-04-11
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Auch, Lydia A.
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Miyamoto, Takashi
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule inhibitors of Sterile Alpha and TIR Motif containing 1 (SARM1) protein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • C07D 487/04 - Ortho-condensed systems
  • A61K 31/41 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which is nitrogen, e.g. tetrazole
  • A61K 31/437 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom ortho- or peri-condensed with heterocyclic ring systems the heterocyclic ring system containing a five-membered ring having nitrogen as a ring hetero atom, e.g. indolizine, beta-carboline
  • A61K 31/519 - PyrimidinesHydrogenated pyrimidines, e.g. trimethoprim ortho- or peri-condensed with heterocyclic rings

35.

METHODS FOR TREATING AND MONITORING FRONTOTEMPORAL DEMENTIA

      
Application Number 18248818
Status Pending
Filing Date 2021-10-13
First Publication Date 2024-02-29
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Astarita, Giuseppe
  • Devos, Sarah L.
  • Di Paolo, Gilbert
  • Fang, Meng
  • Huang, Fen
  • Logan, Todd P.
  • Simon, Matthew J.

Abstract

The present disclosure provides methods and materials for screening a compound or monitoring a subjects response to a compound or dosing regimen for treating frontotemporal dementia (FTD). Methods and materials for identifying and treating a subject having FTD are also provided.

IPC Classes  ?

  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants

36.

SOLID FORMS OF A COMPOUND

      
Application Number 18268144
Status Pending
Filing Date 2021-12-17
First Publication Date 2024-02-22
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Hale, Christopher R.H.
  • Ran, Yingqing
  • Sudhakar, Anantha

Abstract

Forms of 2-(4-chlorophenoxy)-N-[3-[5-[cis-3-(trifluoromethoxy)cyclobutyl]-1,3,4-oxadiazol-2-yl]-1-bicyclo[1.1.1]pentanyl]acetamide, designated herein as Compound I, were prepared and characterized in the solid state. Also provided are processes of manufacture and methods of using the forms of Compound I. Forms of 2-(4-chlorophenoxy)-N-[3-[5-[cis-3-(trifluoromethoxy)cyclobutyl]-1,3,4-oxadiazol-2-yl]-1-bicyclo[1.1.1]pentanyl]acetamide, designated herein as Compound I, were prepared and characterized in the solid state. Also provided are processes of manufacture and methods of using the forms of Compound I. C

IPC Classes  ?

  • C07D 271/10 - 1,3,4-OxadiazolesHydrogenated 1,3,4-oxadiazoles

37.

SOLID FORMS OF 4-(3,3-DIFLUORO-2,2-DIMETHYL-PROPANOYL)-3,5- DIHYDRO-2H-PYRIDO[3,4-F][L,4]OXAZEPINE-9-CARBONITRILE

      
Application Number US2023028439
Publication Number 2024/025817
Status In Force
Filing Date 2023-07-24
Publication Date 2024-02-01
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • De Vicente Fidalgo, Javier
  • Fox, Brian M.
  • Hale, Christopher R.H.

Abstract

Described herein are solid forms of 4-(3,3-difluoro-2,2-dimethyl-propanoyl)-3,5-dihydro-2H-pyrido[3,4-f][1,4]oxazepine-9-carbonitrile, the process of preparing the forms, pharmaceutical compositions comprising same, and methods of use thereof.

IPC Classes  ?

  • C07D 498/04 - Ortho-condensed systems
  • A61P 3/00 - Drugs for disorders of the metabolism
  • A61P 9/00 - Drugs for disorders of the cardiovascular system
  • A61P 11/00 - Drugs for disorders of the respiratory system
  • A61P 25/00 - Drugs for disorders of the nervous system
  • A61P 27/00 - Drugs for disorders of the senses
  • A61P 37/00 - Drugs for immunological or allergic disorders
  • A61K 31/553 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having seven-membered rings, e.g. azelastine, pentylenetetrazole having at least one nitrogen and at least one oxygen as ring hetero atoms, e.g. loxapine, staurosporine

38.

ENGINEERED TRANSFERRIN RECEPTOR BINDING POLYPEPTIDES

      
Application Number 18465078
Status Pending
Filing Date 2023-09-11
First Publication Date 2024-01-18
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Chen, Xiaocheng
  • Dennis, Mark S.
  • Kariolis, Mihalis
  • Silverman, Adam P.
  • Srivastava, Ankita
  • Watts, Ryan J.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are polypeptides that bind to a transferrin receptor, methods of generating such polypeptides, and methods of using the polypeptides to target a composition to a transferrin receptor-expressing cell.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants

39.

TRANSFERRIN RECEPTOR BINDING MOLECULE CONJUGATES FOR DELIVERY OF OLIGONUCLEOTIDES TO CELLS

      
Application Number US2023069481
Publication Number 2024/006976
Status In Force
Filing Date 2023-06-30
Publication Date 2024-01-04
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Tran, Hai
  • Wells, Robert C.
  • Devos, Sarah L.
  • Dennis, Mark S.

Abstract

Provided herein are conjugates comprising: an anti-TfR antibody antigen binding domain that binds to a transferrin receptor and an oligonucleotide(s). The conjugates can be used to deliver an oligonucleotide to a cell that expresses the transferrin receptor. Delivering the oligonucleotide to a cell can be used to modulate expression of a target gene or sequence in the cell.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C07K 16/00 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies
  • C07K 14/79 - Transferrins, e.g. lactoferrins, ovotransferrins
  • A61K 38/00 - Medicinal preparations containing peptides

40.

PROCESS FOR PREPARING MODULATORS OF EUKARYOTIC INITIATION FACTOR 2B

      
Document Number 03259112
Status Pending
Filing Date 2023-06-22
Open to Public Date 2023-12-28
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Sudhakar, Anantha
  • Brak, Katrien
  • Hale, Christopher R. H.

IPC Classes  ?

  • C07C 61/15 - Saturated compounds containing halogen
  • C07C 241/02 - Preparation of hydrazines
  • C07C 243/36 - Hydrazines having nitrogen atoms of hydrazine groups acylated by carboxylic acids with acylating carboxyl groups bound to carbon atoms of rings other than six-membered aromatic rings
  • C07D 265/30 - 1,4-OxazinesHydrogenated 1,4-oxazines not condensed with other rings
  • C07D 271/10 - 1,3,4-OxadiazolesHydrogenated 1,3,4-oxadiazoles

41.

PROCESS FOR PREPARING MODULATORS OF EUKARYOTIC INITIATION FACTOR 2B

      
Application Number US2023026021
Publication Number 2023/250107
Status In Force
Filing Date 2023-06-22
Publication Date 2023-12-28
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Brak, Katrien
  • Hale, Christopher, R., H.
  • Sudhakar, Anantha

Abstract

The present disclosure relates generally to methods for the preparation of Compound (I-1): I-1 or a stereoisomer or mixture of stereoisomers thereof, or salt of each thereof, as well as compounds and salts which are useful in the synthesis thereof.

IPC Classes  ?

  • C07C 61/15 - Saturated compounds containing halogen
  • C07C 241/02 - Preparation of hydrazines
  • C07C 243/36 - Hydrazines having nitrogen atoms of hydrazine groups acylated by carboxylic acids with acylating carboxyl groups bound to carbon atoms of rings other than six-membered aromatic rings
  • C07D 265/30 - 1,4-OxazinesHydrogenated 1,4-oxazines not condensed with other rings
  • C07D 271/10 - 1,3,4-OxadiazolesHydrogenated 1,3,4-oxadiazoles

42.

FUSION PROTEINS COMPRISING PROGRANULIN

      
Application Number 18299458
Status Pending
Filing Date 2023-04-12
First Publication Date 2023-12-21
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Di Paolo, Gilbert
  • Logan, Todd P.
  • Monroe, Kathryn M.
  • Srivastava, Ankita
  • Van Lengerich, Bettina

Abstract

Provided herein are fusion proteins that comprise progranulin and an Fc polypeptide. Methods of using such proteins to treat progranulin-associated disorders (e.g., a neurodegenerative disease, such as frontotemporal dementia (FTD)) are also provided herein.

IPC Classes  ?

43.

A QUANTITATIVE PHARMACOLOGICAL MODEL OF ENZYME REPLACEMENT THERAPY

      
Application Number US2023025067
Publication Number 2023/244540
Status In Force
Filing Date 2023-06-12
Publication Date 2023-12-21
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Gadkar, Kapil G.
  • Jafarnejad, Mohammad
  • Thorne, Robert G.

Abstract

This disclosure relates to systems and methods for modeling the pharmacokinetics and pharmacodynamics of enzyme replacement therapies (ERT) in various systems and tissues.

IPC Classes  ?

  • G16B 5/00 - ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
  • A61P 35/00 - Antineoplastic agents
  • G16H 20/10 - ICT specially adapted for therapies or health-improving plans, e.g. for handling prescriptions, for steering therapy or for monitoring patient compliance relating to drugs or medications, e.g. for ensuring correct administration to patients
  • G16H 50/50 - ICT specially adapted for medical diagnosis, medical simulation or medical data miningICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for simulation or modelling of medical disorders
  • G01N 33/00 - Investigating or analysing materials by specific methods not covered by groups

44.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023067998
Publication Number 2023/240084
Status In Force
Filing Date 2023-06-06
Publication Date 2023-12-14
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Auch, Lydia A.
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Miyamoto, Takashi
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule inhibitors of Sterile Alpha and TIR Motif containing 1 (SARM1) protein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • C07D 213/56 - Amides
  • C07D 237/08 - Heterocyclic compounds containing 1,2-diazine or hydrogenated 1,2-diazine rings not condensed with other rings having three double bonds between ring members or between ring members and non-ring members with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to ring carbon atoms
  • C07D 239/26 - Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to ring carbon atoms
  • C07D 403/04 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia

45.

AFFINITY-BASED METHODS FOR USING TRANSFERRIN RECEPTOR-BINDING PROTEINS

      
Application Number 18166223
Status Pending
Filing Date 2023-02-08
First Publication Date 2023-11-30
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Dennis, Mark S.
  • Getz, Jennifer
  • Kariolis, Mihalis
  • Silverman, Adam P.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are methods for transporting agents across the blood brain barrier. In some embodiments, the agents bind to therapeutic targets for the treatment of neurodegenerative diseases. As described herein, the agents are linked to proteins that bind to a transferrin receptor.

IPC Classes  ?

  • A61K 38/40 - Transferrins, e.g. lactoferrins, ovotransferrins
  • A61K 47/64 - Drug-peptide, drug-protein or drug-polyamino acid conjugates, i.e. the modifying agent being a peptide, protein or polyamino acid which is covalently bonded or complexed to a therapeutically active agent
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C07K 14/79 - Transferrins, e.g. lactoferrins, ovotransferrins

46.

TRANSFERRIN RECEPTOR-BINDING DOMAINS AND PROTEINS COMPRISING THE SAME

      
Application Number US2023022334
Publication Number 2023/224956
Status In Force
Filing Date 2023-05-16
Publication Date 2023-11-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Park, Joshua I.
  • Tran, Hai L.

Abstract

Provided herein are transferrin receptor-binding domains, polypeptides comprising a transferrin receptor-binding domain, and antibodies and antibody fragments comprising a transferrin receptor-binding domain, and uses of the same.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 9/24 - Hydrolases (3.) acting on glycosyl compounds (3.2)
  • C07K 14/475 - Growth factorsGrowth regulators

47.

METHODS FOR TREATING BRAIN GLUCOSE HYPOMETABOLISM

      
Application Number US2023016569
Publication Number 2023/192282
Status In Force
Filing Date 2023-03-28
Publication Date 2023-10-05
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Di Paolo, Gilbert
  • Monroe, Kathryn M.
  • Suh, Jung H.
  • Van Lengerich, Bettina
  • Xia, Dan

Abstract

Certain embodiments provide a method for treating brain glucose hypometabolism in a subject in need thereof, comprising administering to the subject an effective amount of an agonist anti-triggering receptor expressed on myeloid cells 2 (TREM2) antibody.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants

48.

MONOVALENT ANTI-TREM2 BINDING MOLECULES AND METHODS OF USE THEREOF

      
Application Number US2023016578
Publication Number 2023/192288
Status In Force
Filing Date 2023-03-28
Publication Date 2023-10-05
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Dennis, Mark S.
  • Di Paolo, Gilbert
  • Modi, Anuja R.
  • Monroe, Kathryn M.
  • Silverman, Adam P.
  • Van Lengerich, Bettina
  • Zhan, Lihong

Abstract

In one aspect, monovalent binding molecules that specifically bind to a human triggering receptor expressed on myeloid cells 2 (TREM2) protein are provided, as well as methods of use thereof.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia

49.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023016743
Publication Number 2023/192390
Status In Force
Filing Date 2023-03-29
Publication Date 2023-10-05
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Osipov, Maksim

Abstract

The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • C07D 401/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 471/04 - Ortho-condensed systems
  • C07D 487/04 - Ortho-condensed systems
  • C07D 217/24 - Oxygen atoms

50.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023063523
Publication Number 2023/168298
Status In Force
Filing Date 2023-03-01
Publication Date 2023-09-07
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Auch, Lydia, A.
  • Bagdasarian, Alex, L.
  • Bucher, Cyril
  • Craig, Ii, Robert, A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony, A.
  • Fox, Brian, M.
  • Huffman, Benjamin, J.
  • Lexa, Katrina, W.
  • Miyamoto, Takashi
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule inhibitors of Sterile Alpha and TIR Motif containing 1 (SARM1) protein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • C07D 213/00 - Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members
  • C07D 401/04 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 403/04 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 221/00 - Heterocyclic compounds containing six-membered rings having one nitrogen atom as the only ring hetero atom, not provided for by groups
  • A61K 31/444 - Non-condensed pyridinesHydrogenated derivatives thereof containing further heterocyclic ring systems containing a six-membered ring with nitrogen as a ring hetero atom, e.g. amrinone
  • A61P 25/00 - Drugs for disorders of the nervous system

51.

Crystalline forms of (S)-5-benzyl-N-(5-methyl-4-oxo-2,3,4,5-tetrahydropyrido [3,2-B][1,4]oxazepin-3-yl)-4H-1,2,4-triazole-3-carboxamide

      
Application Number 18095621
Grant Number 11999750
Status In Force
Filing Date 2023-01-11
First Publication Date 2023-08-31
Grant Date 2024-06-04
Owner DENALI THERAPEUTICS INC. (USA)
Inventor Sudhakar, Anantha

Abstract

Described herein are crystalline forms of (S)-5-benzyl-N-(5-methyl-4-oxo-2,3,4,5-tetrahydropyrido [3,2-b][1,4]oxazepin-3-yl)-4H-1,2,4-triazole-3-carboxamide, the process of preparing the forms, and pharmaceutical compositions methods of use thereof.

IPC Classes  ?

  • C07D 498/04 - Ortho-condensed systems
  • A61K 31/553 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having seven-membered rings, e.g. azelastine, pentylenetetrazole having at least one nitrogen and at least one oxygen as ring hetero atoms, e.g. loxapine, staurosporine
  • A61P 29/00 - Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agentsNon-steroidal antiinflammatory drugs [NSAID]

52.

PROGRANULIN VARIANTS

      
Application Number 18189413
Status Pending
Filing Date 2023-03-24
First Publication Date 2023-08-24
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Cherf, Gerald Maxwell
  • Kannan, Gunasekaran
  • Lexa, Katrina W.
  • Low, Ray L. Y.
  • Prorok, Rachel
  • Srivastava, Ankita

Abstract

Provided herein are progranulin variants and fusion proteins that comprise a progranulin variant and an Fc polypeptide. Methods of using such proteins to treat progranulin-associated disorders (e.g., a neurodegenerative disease, such as frontotemporal dementia (FTD)) are also provided herein.

IPC Classes  ?

  • C07K 14/47 - Peptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from animalsPeptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from humans from vertebrates from mammals
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • C07K 14/475 - Growth factorsGrowth regulators

53.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2023013164
Publication Number 2023/158708
Status In Force
Filing Date 2023-02-15
Publication Date 2023-08-24
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bagdasarian, Alex L.
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Hu, Cheng
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Nilewski, Lizanne G.
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof. Further disclosed a method for treating a disease or condition mediated, at least in part, by NLRP3, the method comprising administering an effective amount of the pharmaceutical composition, to a subject in need thereof.

IPC Classes  ?

  • A61K 31/502 - PyridazinesHydrogenated pyridazines ortho- or peri-condensed with carbocyclic ring systems, e.g. cinnoline, phthalazine
  • A61K 31/506 - PyrimidinesHydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
  • C07D 237/32 - Phthalazines with oxygen atoms directly attached to carbon atoms of the nitrogen-containing ring
  • C07D 253/06 - 1,2,4-Triazines
  • A61P 1/16 - Drugs for disorders of the alimentary tract or the digestive system for liver or gallbladder disorders, e.g. hepatoprotective agents, cholagogues, litholytics
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • A61P 29/00 - Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agentsNon-steroidal antiinflammatory drugs [NSAID]

54.

Methods of engineering transferrin receptor binding polypeptides

      
Application Number 17888406
Grant Number 11912778
Status In Force
Filing Date 2022-08-15
First Publication Date 2023-07-27
Grant Date 2024-02-27
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Chen, Xiaocheng
  • Dennis, Mark S.
  • Kariolis, Mihalis
  • Silverman, Adam P.
  • Srivastava, Ankita
  • Watts, Ryan J.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are polypeptides that bind to a transferrin receptor, methods of generating such polypeptides, and methods of using the polypeptides to target a composition to a transferrin receptor-expressing cell.

IPC Classes  ?

  • C40B 30/04 - Methods of screening libraries by measuring the ability to specifically bind a target molecule, e.g. antibody-antigen binding, receptor-ligand binding
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C07K 16/00 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies
  • C12N 15/10 - Processes for the isolation, preparation or purification of DNA or RNA
  • C40B 20/00 - Methods specially adapted for identifying library members
  • C40B 50/00 - Methods of creating libraries, e.g. combinatorial synthesis

55.

CRYSTALLINE FORMS OF (S)-5-BENZYL-N-(5-METHYL-4-OXO-2,3,4,5-TETRAHYDROPYRIDO [3,2-B][1,4]OXAZEPIN-3-YL)-4H-1,2,4-TRIAZOLE-3-CARBOXAMIDE

      
Document Number 03245090
Status Pending
Filing Date 2023-01-11
Open to Public Date 2023-07-20
Owner DENALI THERAPEUTICS INC. (USA)
Inventor Sudhakar, Anantha

Abstract

Described herein are crystalline forms of (S)-5-benzyl-N-(5-methyl-4-oxo-2,3,4,5-tetrahydropyrido [3.2-b][1.4]oxazepin-3-yl)-4H-1.2,4-triazole-3-carboxamide, the process of preparing the forms, and pharmaceutical compositions methods of use thereof.

IPC Classes  ?

  • A61K 31/553 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having seven-membered rings, e.g. azelastine, pentylenetetrazole having at least one nitrogen and at least one oxygen as ring hetero atoms, e.g. loxapine, staurosporine
  • A61P 25/00 - Drugs for disorders of the nervous system
  • A61P 37/00 - Drugs for immunological or allergic disorders
  • C07D 498/04 - Ortho-condensed systems

56.

Compounds, compositions, and methods

      
Application Number 18099082
Grant Number 11834439
Status In Force
Filing Date 2023-01-19
First Publication Date 2023-07-20
Grant Date 2023-12-05
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Lyssikatos, Joseph P.
  • Sweeney, Zachary K.

Abstract

The present disclosure relates generally to LRRK2 inhibitors, or a pharmaceutically acceptable salt, deuterated analog, prodrug, tautomer, stereoisomer, or mixture of stereoisomers thereof, and methods of making and using thereof.

IPC Classes  ?

  • C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 401/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing three or more hetero rings
  • C07D 413/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 417/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07D 491/20 - Spiro-condensed systems
  • C07D 498/04 - Ortho-condensed systems
  • C07B 59/00 - Introduction of isotopes of elements into organic compounds
  • C07D 403/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07D 405/14 - Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing three or more hetero rings
  • C07D 409/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 487/04 - Ortho-condensed systems

57.

CRYSTALLINE FORMS OF (S)-5-BENZYL-N-(5-METHYL-4-OXO-2, 3,4,5- TETRAHYDROPYRIDO [3,2-B] [L,4]OXAZEPIN-3-YL)-4H-L,2,4-TRIAZOLE-3-CARBOXAMIDE

      
Application Number US2023010551
Publication Number 2023/137035
Status In Force
Filing Date 2023-01-11
Publication Date 2023-07-20
Owner DENALI THERAPEUTICS INC. (USA)
Inventor Sudhakar, Anantha

Abstract

Described herein are crystalline forms of (S)-5-benzyl-N-(5-methyl-4-oxo-2,3,4,5-tetrahydropyrido [3,2-b][1,4]oxazepin-3-yl)-4H-1,2,4-triazole-3-carboxamide, the process of preparing the forms, and pharmaceutical compositions methods of use thereof.

IPC Classes  ?

  • A61P 25/00 - Drugs for disorders of the nervous system
  • A61P 37/00 - Drugs for immunological or allergic disorders
  • C07D 498/04 - Ortho-condensed systems
  • A61K 31/553 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having seven-membered rings, e.g. azelastine, pentylenetetrazole having at least one nitrogen and at least one oxygen as ring hetero atoms, e.g. loxapine, staurosporine

58.

ANTI-PILRA ANTIBODIES, USES THEREOF, AND RELATED METHODS AND REAGENTS

      
Document Number 03242973
Status Pending
Filing Date 2022-12-16
Open to Public Date 2023-06-22
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Da Roza, Claire
  • Kim, Do Jin
  • Lisaingo, Kathleen
  • Macdonald, Madeline
  • Monroe, Kathryn M.
  • Park, Joshua I.
  • Propson, Nicholas E.
  • Sabelstrom, Hanna
  • Theolis Jr., Richard
  • Weerakkody, Tanya N.
  • Yang, Alexander

Abstract

Provided herein are anti-PILRA antibodies with the highly desirable selectivity: having comparable binding to cynomolgus and human PILRA proteins, but much weaker binding to human PILRB protein, as well as binding to both PILRA G78 and R78 variants. The binding and selectivity profiles of the antibodies described herein allow for them to be used in animal studies (e.g., monkeys) without the need to rely on a surrogate molecule and also when treating subjects with either PILRA variant. Further described herein, for the first time, are biological discoveries related to PILRA and the effects of reducing PILRA signaling in cells.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 5/074 - Adult stem cells

59.

FUSION PROTEINS COMPRISING ALPHA-L-IDURONIDASE ENZYMES AND METHODS

      
Application Number US2022053196
Publication Number 2023/114485
Status In Force
Filing Date 2022-12-16
Publication Date 2023-06-22
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Adusumilli, Gowrisudha
  • Davis, Oliver Brayer
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.
  • Tyagi, Shrishti
  • Yamanokuchi, Kensuke

Abstract

Provided herein are proteins, which are capable of being transported across the blood-brain barrier (BBB) and comprise an alpha-L-iduronidase (IDUA) enzyme-Fc fusion polypeptide. Certain embodiments also provide methods of using such proteins to treat MPS I.

IPC Classes  ?

  • C12N 9/24 - Hydrolases (3.) acting on glycosyl compounds (3.2)
  • A61K 38/47 - Hydrolases (3) acting on glycosyl compounds (3.2), e.g. cellulases, lactases
  • A61P 3/00 - Drugs for disorders of the metabolism

60.

POLYPEPTIDE ENGINEERING, LIBRARIES, AND ENGINEERED CD98 HEAVY CHAIN AND TRANSFERRIN RECEPTOR BINDING POLYPEPTIDES

      
Application Number US2022053220
Publication Number 2023/114499
Status In Force
Filing Date 2022-12-16
Publication Date 2023-06-22
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Akkapeddi, Padma
  • Cherf, Gerald Maxwell
  • Chew, Kylie S.
  • Dennis, Mark S.
  • Gu, Zhenyu
  • Kariolis, Mihalis S.
  • Tran, Hai L.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

The present dislcosure includes engineering methods and polypeptide libraries that are useful for introducing non-native binding sites into polypeptides. Also provided herein are polypeptides that bind to a CD98hc or transferrin receptor (TfR) protein, methods of generating such polypeptides, and methods of using the polypeptides to target a composition across the blood-brain barrier or to a CD98hc-expressing or TfR-expressing cell.

IPC Classes  ?

  • C07K 16/00 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies
  • C07K 14/79 - Transferrins, e.g. lactoferrins, ovotransferrins
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • A61P 25/00 - Drugs for disorders of the nervous system
  • C12N 15/10 - Processes for the isolation, preparation or purification of DNA or RNA
  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids

61.

ANTI-PILRA ANTIBODIES, USES THEREOF, AND RELATED METHODS AND REAGENTS

      
Application Number US2022053245
Publication Number 2023/114515
Status In Force
Filing Date 2022-12-16
Publication Date 2023-06-22
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Da Roza, Claire
  • Kim, Do Jin
  • Lisaingo, Kathleen
  • Macdonald, Madeline
  • Monroe, Kathryn M.
  • Park, Joshua I.
  • Propson, Nicholas E.
  • Sabelström, Hanna
  • Théolis Jr., Richard
  • Weerakkody, Tanya N.
  • Yang, Alexander

Abstract

Provided herein are anti-PILRA antibodies with the highly desirable selectivity: having comparable binding to cynomolgus and human PILRA proteins, but much weaker binding to human PILRB protein, as well as binding to both PILRA G78 and R78 variants. The binding and selectivity profiles of the antibodies described herein allow for them to be used in animal studies (e.g., monkeys) without the need to rely on a surrogate molecule and also when treating subjects with either PILRA variant. Further described herein, for the first time, are biological discoveries related to PILRA and the effects of reducing PILRA signaling in cells.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 5/074 - Adult stem cells

62.

FUSION PROTEINS COMPRISING ALPHA-L-IDURONIDASE ENZYMES AND METHODS

      
Document Number 03241240
Status Pending
Filing Date 2022-12-16
Open to Public Date 2023-06-22
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Adusumilli, Gowrisudha
  • Davis, Oliver Brayer
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.
  • Tyagi, Shrishti
  • Yamanokuchi, Kensuke

Abstract

Provided herein are proteins, which are capable of being transported across the blood-brain barrier (BBB) and comprise an alpha-L-iduronidase (IDUA) enzyme-Fc fusion polypeptide. Certain embodiments also provide methods of using such proteins to treat MPS I.

IPC Classes  ?

  • A61K 38/47 - Hydrolases (3) acting on glycosyl compounds (3.2), e.g. cellulases, lactases
  • A61P 3/00 - Drugs for disorders of the metabolism
  • C12N 9/24 - Hydrolases (3.) acting on glycosyl compounds (3.2)

63.

ENGINEERED ANTI-HER2 BISPECIFIC PROTEINS

      
Application Number 17819182
Status Pending
Filing Date 2022-08-11
First Publication Date 2023-06-22
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Kannan, Gunasekaran
  • Kim, Do Jin
  • Kwan, Wanda
  • Tong, Raymond Ka Hang

Abstract

In one aspect, bispecific proteins having the ability to specifically bind to both subdomain II of human HER2 and subdomain IV of human HER2 are provided. In another aspect, methods of treating a cancer or treating brain metastasis of a cancer using a bispecific protein that specifically binds to subdomain II and subdomain IV of human HER2 are provided.

IPC Classes  ?

  • C07K 16/32 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against translation products from oncogenes
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • A61P 35/00 - Antineoplastic agents
  • A61P 35/04 - Antineoplastic agents specific for metastasis
  • A61P 25/00 - Drugs for disorders of the nervous system

64.

POLYPEPTIDE ENGINEERING, LIBRARIES, AND ENGINEERED CD98 HEAVY CHAIN AND TRANSFERRIN RECEPTOR BINDING POLYPEPTIDES

      
Application Number US2022053234
Publication Number 2023/114510
Status In Force
Filing Date 2022-12-16
Publication Date 2023-06-22
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Dennis, Mark S.
  • Kariolis, Mihalis S.
  • Tran, Hai L.
  • Wells, Robert C.

Abstract

The present dislcosure includes engineering methods and polypeptide libraries that are useful for introducing non-native binding sites into polypeptides. Also provided herein are polypeptides that bind to a CD98hc or transferrin receptor (TfR) protein, methods of generating such polypeptides, and methods of using the polypeptides to target a composition across the blood-brain barrier or to a CD98hc-expressing or TfR-expressing cell.

IPC Classes  ?

  • C07K 16/00 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies
  • C07K 14/79 - Transferrins, e.g. lactoferrins, ovotransferrins
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • A61P 25/00 - Drugs for disorders of the nervous system
  • C12N 15/10 - Processes for the isolation, preparation or purification of DNA or RNA
  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids

65.

METHODS FOR TREATING DYSREGULATED LIPID METABOLISM

      
Application Number 17296506
Status Pending
Filing Date 2019-11-26
First Publication Date 2023-04-27
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Astarita, Giuseppe
  • Di Paolo, Gilbert
  • Lin, Kai Lin
  • Monroe, Kathryn M.
  • Nugent, Alicia A.
  • Van Lengerich, Bettina

Abstract

Certain embodiments described herein provide a method for treating dysregulated lipid metabolism and/or inflammation in a mammal in need thereof, comprising administering to the mammal an effective amount of an agonist anti-triggering receptor expressed on myeloid cells 2 (TREM2) antibody.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • A61P 3/00 - Drugs for disorders of the metabolism

66.

MICROGLIAL CELL MORPHOMETRY

      
Application Number US2022047090
Publication Number 2023/069487
Status In Force
Filing Date 2022-10-19
Publication Date 2023-04-27
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Calvert, Meredith
  • Joy, David

Abstract

Methods and systems described herein may allow for the classification of microglial morphology at single cell resolution. Microglial cell states may be determined, and a biological sample from which the microglial cells are obtained may be classified based on the microglial cell states. Classifying microglial cells may involving segmenting microglia cells into soma and processes in immunofluorescence microscopy images. Additionally, a feature bank may be generated. Values of the features in the feature bank may be measured for an image. Cells may be clustered using the values of the features in the feature bank. The cells in a cluster may be compared to a reference cell with a known state and having known morphological properties. The cluster in the cell may then be assigned the same state as a reference cell. The amount of cells having the state may then be used to determine properties of the biological sample.

IPC Classes  ?

  • G06T 7/00 - Image analysis
  • G06V 20/69 - Microscopic objects, e.g. biological cells or cellular parts

67.

Compounds, compositions and methods

      
Application Number 17702718
Grant Number 11958840
Status In Force
Filing Date 2022-03-23
First Publication Date 2023-04-13
Grant Date 2024-04-16
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Fox, Brian M.
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to eukaryotic initiation factor 2B modulators, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, and methods of making and using thereof.

IPC Classes  ?

  • C07D 413/04 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 271/113 - 1,3,4-OxadiazolesHydrogenated 1,3,4-oxadiazoles with oxygen, sulfur or nitrogen atoms, directly attached to ring carbon atoms, the nitrogen atoms not forming part of a nitro radical
  • C07D 413/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 417/04 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 417/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07D 493/08 - Bridged systems

68.

METHODS FOR THE TREATMENT OF HUNTER SYNDROME

      
Application Number 17797644
Status Pending
Filing Date 2021-02-05
First Publication Date 2023-03-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Arguello, Annie
  • Cahan, Heather
  • Daryani, Vinay M.
  • Grover, Anita
  • Troyer, Matthew D.

Abstract

Certain embodiments provide a method of treating Hunter syndrome in a subject in need thereof, comprising administering to the subject a therapeutically effective dose of a pharmaceutical composition comprising an ETV:IDS protein.

IPC Classes  ?

  • A61K 38/17 - Peptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from animalsPeptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from humans
  • A61K 38/46 - Hydrolases (3)
  • A61K 9/00 - Medicinal preparations characterised by special physical form
  • A61P 3/00 - Drugs for disorders of the metabolism

69.

COMPOUNDS, COMPOSITIONS AND METHODS

      
Application Number US2022043860
Publication Number 2023/044043
Status In Force
Filing Date 2022-09-16
Publication Date 2023-03-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Craig, Robert A., Ii
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • A61K 31/54 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with at least one nitrogen and at least one sulfur as the ring hetero atoms, e.g. sulthiame
  • A61K 31/33 - Heterocyclic compounds
  • A61K 31/5365 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with at least one nitrogen and at least one oxygen as the ring hetero atoms, e.g. 1,2-oxazines ortho- or peri-condensed with heterocyclic ring systems
  • A61K 31/395 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
  • A61K 31/381 - Heterocyclic compounds having sulfur as a ring hetero atom having five-membered rings
  • A61K 31/4743 - QuinolinesIsoquinolines ortho- or peri-condensed with heterocyclic ring systems condensed with ring systems having sulfur as a ring hetero atom

70.

ENGINEERED ANTI-HER2 BISPECIFIC PROTEINS

      
Application Number US2022041471
Publication Number 2023/038803
Status In Force
Filing Date 2022-08-25
Publication Date 2023-03-16
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bandyopadhyay, Abira
  • Clemens, Allisa Jayne
  • Kim, Do Jin
  • Pizzo, Michelle E.
  • Shan, Lu
  • Théolis Jr., Richard
  • Tong, Raymond Ka Hang

Abstract

In one aspect, bispecific proteins having the ability to specifically bind to both subdomain II of human HER2 and subdomain IV of human HER2 are provided. In another aspect, methods of treating a cancer or treating brain metastasis of a cancer using a bispecific protein that specifically binds to subdomain II and subdomain IV of human HER2 are provided.

IPC Classes  ?

  • A61K 39/00 - Medicinal preparations containing antigens or antibodies
  • C07K 16/32 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against translation products from oncogenes

71.

ANTI-ALPHA-SYNUCLEIN ANTIBODIES AND METHODS OF USE THEREOF

      
Application Number 17761088
Status Pending
Filing Date 2020-09-18
First Publication Date 2023-03-09
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Guo, Jing
  • Hao, Rui
  • Kim, Do Jin
  • Poda, Suresh
  • Shukla, Rinkan
  • Silverman, Adam P.

Abstract

In one aspect, antibodies that specifically bind to a human alpha-synuclein protein are provided. In some embodiments, an anti-alpha-synuclein antibody binds to monomeric human alpha-synuclein protein, oligomeric human alpha-synuclein protein, soluble human alpha-synuclein protein, human alpha-synuclein protein fibrils, and human alpha-synuclein protein that is phosphorylated at Ser129 (pSer129) with high affinity. In some embodiments, an anti-alpha-synuclein antibody can specifically bind to or immunodeplete alpha-synuclein protein. In some embodiments, an anti-alpha-synuclein antibody can prevent or inhibit alpha-synuclein seeding.

IPC Classes  ?

  • C07K 16/18 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans

72.

ANTI-HER2 ANTIBODIES AND METHODS OF USE THEREOF

      
Application Number US2022075438
Publication Number 2023/028543
Status In Force
Filing Date 2022-08-25
Publication Date 2023-03-02
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bandyopadhyay, Abira
  • Clemens, Allisa Jayne
  • Kim, Do Jin
  • Pizzo, Michelle E.
  • Shan, Lu
  • Théolis Jr., Richard
  • Tong, Raymond Ka Hang

Abstract

In one aspect, antibodies that bind to subdomain II of human HER2 are provided. In another aspect, antibodies comprising a light chain polypeptide that pairs with both a heavy chain polypeptide for binding to subdomain II of human HER2 and a heavy chain polypeptide for binding to subdomain IV of human HER2 are provided. In a further aspect, antibodies that bind to both subdomain II and subdomain IV of human HER2 comprising a common light chain polypeptide are provided. Methods of treating a cancer or treating brain metastasis of a cancer using these antibodies are also provided.

IPC Classes  ?

  • C07K 16/32 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against translation products from oncogenes
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • A61K 39/395 - AntibodiesImmunoglobulinsImmune serum, e.g. antilymphocytic serum
  • A61P 35/00 - Antineoplastic agents

73.

ANTI-HER2 ANTIBODIES AND METHODS OF USE THEREOF

      
Document Number 03229542
Status Pending
Filing Date 2022-08-25
Open to Public Date 2023-03-02
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bandyopadhyay, Abira
  • Clemens, Allisa Jayne
  • Kim, Do Jin
  • Pizzo, Michelle E.
  • Shan, Lu
  • Theolis Jr., Richard
  • Tong, Raymond Ka Hang

Abstract

In one aspect, antibodies that bind to subdomain II of human HER2 are provided. In another aspect, antibodies comprising a light chain polypeptide that pairs with both a heavy chain polypeptide for binding to subdomain II of human HER2 and a heavy chain polypeptide for binding to subdomain IV of human HER2 are provided. In a further aspect, antibodies that bind to both subdomain II and subdomain IV of human HER2 comprising a common light chain polypeptide are provided. Methods of treating a cancer or treating brain metastasis of a cancer using these antibodies are also provided.

IPC Classes  ?

  • A61K 39/395 - AntibodiesImmunoglobulinsImmune serum, e.g. antilymphocytic serum
  • A61P 35/00 - Antineoplastic agents
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C07K 16/30 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants from tumour cells

74.

Fusion proteins comprising sulfoglucosamine sulfohydrolase enzymes and methods thereof

      
Application Number 17855543
Grant Number 11884944
Status In Force
Filing Date 2022-06-30
First Publication Date 2023-03-02
Grant Date 2024-01-30
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Giese, Tina
  • Kannan, Gunasekaran
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.

Abstract

Provided herein are proteins, which are capable of being transported across the blood-brain barrier (BBB) and comprise sulfoglucosamine sulfohydrolase (SGSH) enzyme-Fc fusion polypeptides. Certain embodiments also provide methods of using such proteins to treat Sanfilippo syndrome A.

IPC Classes  ?

  • C07K 14/00 - Peptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof
  • C12N 9/14 - Hydrolases (3.)
  • A61P 3/00 - Drugs for disorders of the metabolism
  • A61K 38/46 - Hydrolases (3)

75.

METHODS FOR THE TREATMENT OF HUNTER SYNDROME

      
Application Number US2022038077
Publication Number 2023/004156
Status In Force
Filing Date 2022-07-22
Publication Date 2023-01-26
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Arguello, Annie
  • Bhalla, Akhil
  • Harris, Jeffrey Mark
  • Troyer, Matthew D.

Abstract

Certain embodiments provide a method of providing added peripheral IDS activity to a subject with Hunter syndrome, comprising administering to the subject a therapeutically effective dose of a pharmaceutical composition comprising a protein comprising an IDS amino acid sequence and a TfR binding domain. The added peripheral IDS activity can be measured by comparing levels of keratan sulfate (KS) in the subject after administration of the pharmaceutical composition relative to a baseline level. Certain embodiments also provide methods of providing a clinical benefit to a subject with Hunter syndrome and improving treatment in a patient having non-neuronopathic Hunter syndrome, as well as methods and treatment regimens for resolving infusion related reactions (IRRs).

IPC Classes  ?

  • A61K 38/16 - Peptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof
  • A61K 38/40 - Transferrins, e.g. lactoferrins, ovotransferrins
  • A61P 3/00 - Drugs for disorders of the metabolism

76.

COMPOUNDS, COMPOSITIONS AND METHODS

      
Application Number US2022037247
Publication Number 2023/288039
Status In Force
Filing Date 2022-07-15
Publication Date 2023-01-19
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bagdasarian, Alex L.
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • A61K 31/33 - Heterocyclic compounds
  • A61K 31/435 - Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
  • C07D 235/02 - Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, condensed with other rings condensed with carbocyclic rings or ring systems
  • A61K 31/00 - Medicinal preparations containing organic active ingredients

77.

OLIGONUCLEOTIDE CONJUGATES TARGETED TO THE TRANSFERRIN RECEPTOR

      
Application Number US2022073377
Publication Number 2023/279099
Status In Force
Filing Date 2022-07-01
Publication Date 2023-01-05
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Barker, Scarlett
  • Dennis, Mark S.
  • Devos, Sarah L.
  • Estrada, Anthony A.
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.
  • Nilewski, Lizanne G.
  • Park, Joshua I.
  • Shan, Lu
  • Thayer, Mai B.
  • Tong, Raymond Ka Hang
  • Tran, Hai L.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are conjugates comprising proteins that bind to a transferrin receptor and oligonucleotides that are capable of modulating the expression of a target gene or sequence, as well as methods of use thereof.

IPC Classes  ?

  • A61K 47/68 - Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additivesTargeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C07K 16/40 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against enzymes
  • C12N 15/00 - Mutation or genetic engineeringDNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purificationUse of hosts therefor

78.

OLIGONUCLEOTIDE CONJUGATES TARGETED TO THE TRANSFERRIN RECEPTOR

      
Document Number 03225542
Status Pending
Filing Date 2022-07-01
Open to Public Date 2023-01-05
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Barker, Scarlett
  • Dennis, Mark S.
  • Devos, Sarah L.
  • Estrada, Anthony A.
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.
  • Nilewski, Lizanne G.
  • Park, Joshua I.
  • Shan, Lu
  • Thayer, Mai B.
  • Tong, Raymond Ka Hang
  • Tran, Hai L.
  • Wells, Robert C.
  • Zuchero, Joy Yu

Abstract

Provided herein are conjugates comprising proteins that bind to a transferrin receptor and oligonucleotides that are capable of modulating the expression of a target gene or sequence, as well as methods of use thereof.

IPC Classes  ?

  • A61K 47/68 - Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additivesTargeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C07K 16/40 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against enzymes
  • C12N 15/00 - Mutation or genetic engineeringDNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purificationUse of hosts therefor

79.

Modulators of eukaryotic initiation factor 2B, compositions and methods

      
Application Number 17531039
Grant Number 11851440
Status In Force
Filing Date 2021-11-19
First Publication Date 2022-12-29
Grant Date 2023-12-26
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Fox, Brian M.
  • Hale, Christopher R. H.
  • Lexa, Katrina W.
  • Osipov, Maksim
  • Remarchuk, Travis
  • Sweeney, Zachary K.

Abstract

The present disclosure relates generally to eukaryotic initiation factor 2B modulators, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers or prodrug thereof, and methods of making and using thereof.

IPC Classes  ?

  • A61K 31/4245 - Oxadiazoles
  • A61K 31/4164 - 1,3-Diazoles
  • A61K 31/415 - 1,2-Diazoles
  • A61K 31/421 - 1,3-Oxazoles, e.g. pemoline, trimethadione
  • C07D 491/048 - Ortho-condensed systems with only one oxygen atom as ring hetero atom in the oxygen-containing ring the oxygen-containing ring being five-membered
  • C07C 235/22 - Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by oxygen atoms having carbon atoms of carboxamide groups bound to acyclic carbon atoms and singly-bound oxygen atoms bound to the same carbon skeleton the carbon skeleton being acyclic and saturated having at least one of the singly-bound oxygen atoms further bound to a carbon atom of a six-membered aromatic ring, e.g. phenoxyacetamides having the nitrogen atom of at least one of the carboxamide groups bound to a carbon atom of a ring other than a six-membered aromatic ring
  • C07D 207/27 - 2-Pyrrolidones with only hydrogen atoms or radicals containing only hydrogen and carbon atoms directly attached to other ring carbon atoms with substituted hydrocarbon radicals directly attached to the ring nitrogen atom
  • C07D 233/36 - One oxygen atom with hydrocarbon radicals, substituted by nitrogen atoms, attached to ring nitrogen atoms
  • C07D 233/42 - Sulfur atoms
  • C07D 233/61 - Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings having two double bonds between ring members or between ring members and non-ring members with only hydrogen atoms or radicals containing only hydrogen and carbon atoms, attached to ring carbon atoms with hydrocarbon radicals, substituted by nitrogen atoms not forming part of a nitro radical, attached to ring nitrogen atoms
  • C07D 233/64 - Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, not condensed with other rings having two double bonds between ring members or between ring members and non-ring members with substituted hydrocarbon radicals attached to ring carbon atoms, e.g. histidine
  • C07D 249/04 - 1,2,3-TriazolesHydrogenated 1,2,3-triazoles
  • C07D 249/08 - 1,2,4-TriazolesHydrogenated 1,2,4-triazoles
  • C07D 257/04 - Five-membered rings
  • C07D 261/04 - Heterocyclic compounds containing 1,2-oxazole or hydrogenated 1,2-oxazole rings not condensed with other rings having one double bond between ring members or between a ring member and a non-ring member
  • C07D 261/08 - Heterocyclic compounds containing 1,2-oxazole or hydrogenated 1,2-oxazole rings not condensed with other rings having two or more double bonds between ring members or between ring members and non-ring members with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to ring carbon atoms
  • C07D 263/32 - Heterocyclic compounds containing 1,3-oxazole or hydrogenated 1,3-oxazole rings not condensed with other rings having two or three double bonds between ring members or between ring members and non-ring members with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to ring carbon atoms
  • C07D 263/38 - One oxygen atom attached in position 2
  • C07D 263/56 - BenzoxazolesHydrogenated benzoxazoles with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached in position 2
  • C07D 271/06 - 1,2,4-OxadiazolesHydrogenated 1,2,4-oxadiazoles
  • C07D 271/10 - 1,3,4-OxadiazolesHydrogenated 1,3,4-oxadiazoles
  • C07D 291/04 - Five-membered rings
  • C07D 401/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 403/04 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 413/04 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 413/06 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
  • C07D 413/12 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 417/04 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 471/04 - Ortho-condensed systems
  • C07D 487/04 - Ortho-condensed systems

80.

METHODS FOR TREATING AND MONITORING PARKINSON'S DISEASE

      
Document Number 03217230
Status Pending
Filing Date 2022-04-29
Open to Public Date 2022-11-03
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Jennings, Danna L.
  • Daryani, Vinay M.
  • Huntwork-Rodriguez, Sarah

Abstract

The present disclosure relates to methods for treating Parkinson's disease in a subject with a compound provided herein, pharmaceutical compositions comprising the compound, as well methods for monitoring subject's response to the treatment.

IPC Classes  ?

  • A61K 31/506 - PyrimidinesHydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
  • A61P 25/16 - Anti-Parkinson drugs
  • C07D 403/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings

81.

METHODS FOR TREATING AND MONITORING PARKINSON'S DISEASE

      
Application Number US2022026898
Publication Number 2022/232487
Status In Force
Filing Date 2022-04-29
Publication Date 2022-11-03
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Jennings, Danna L.
  • Daryani, Vinay M.
  • Huntwork-Rodriguez, Sarah

Abstract

The present disclosure relates to methods for treating Parkinson's disease in a subject with a compound provided herein, pharmaceutical compositions comprising the compound, as well methods for monitoring subject's response to the treatment.

IPC Classes  ?

  • A61K 31/506 - PyrimidinesHydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
  • C07D 403/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • A61P 25/16 - Anti-Parkinson drugs

82.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2022027118
Publication Number 2022/232632
Status In Force
Filing Date 2022-04-29
Publication Date 2022-11-03
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Hu, Cheng
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Nilewski, Lizanne G.
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • C07D 239/42 - One nitrogen atom
  • C07D 401/04 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings directly linked by a ring-member-to-ring- member bond
  • C07D 401/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a chain containing hetero atoms as chain links

83.

ANTI-TRANSFERRIN RECEPTOR FUSION PROTEINS AND METHODS OF USE THEREOF

      
Application Number US2022016229
Publication Number 2022/174114
Status In Force
Filing Date 2022-02-11
Publication Date 2022-08-18
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Arguello, Annie
  • Giese, Tina
  • Kannan, Gunasekaran
  • Kariolis, Mihalis S.
  • Mahon, Cathal S.
  • Wang, Junhua

Abstract

Certain embodiments provide a fusion protein comprising an iduronate 2-sulfatase (IDS) amino acid sequence, an IDS variant amino acid sequence, or a catalytically active fragment thereof; and an anti-transferrin receptor (TfR) antibody as described herein, as well as methods of use thereof.

IPC Classes  ?

  • A61K 47/68 - Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additivesTargeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
  • A61K 47/64 - Drug-peptide, drug-protein or drug-polyamino acid conjugates, i.e. the modifying agent being a peptide, protein or polyamino acid which is covalently bonded or complexed to a therapeutically active agent
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
  • C12N 9/16 - Hydrolases (3.) acting on ester bonds (3.1)
  • C12N 9/14 - Hydrolases (3.)
  • A61P 3/02 - Nutrients, e.g. vitamins, minerals
  • C07K 14/00 - Peptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof

84.

MODIFIED RELEASE FORMULATION OF A PYRIMIDINYLAMINO-PYRAZOLE COMPOUND, AND METHODS OF TREATMENT

      
Application Number 17614842
Status Pending
Filing Date 2020-05-29
First Publication Date 2022-08-11
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Ravivarapu, Harish
  • Remarchuk, Travis
  • Sudhakar, Anantha
  • Wong, Bradley K.

Abstract

The present disclosure relates to modified release formulations of 2-methyl-2-(3-methyl-4-(4-(methylamino)-5-(trifluoromethyl)pyrimidin-2-ylamino)-IH-pyrazol-1-propanenitrile or solvates, tautomers, and pharmaceutically acceptable salts thereof, and methods of treatment with the modified release formulations.

IPC Classes  ?

  • A61K 31/506 - PyrimidinesHydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
  • A61K 9/20 - Pills, lozenges or tablets
  • A61K 9/48 - Preparations in capsules, e.g. of gelatin, of chocolate
  • A61K 9/50 - Microcapsules

85.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number 17602480
Status Pending
Filing Date 2020-04-10
First Publication Date 2022-07-14
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Sweeney, Zachary K.

Abstract

The present disclosure relates generally to LRRK2 inhibitors, or a pharmaceutically acceptable salt, isotopically enriched analog, tautomer, stereoisomer, mixture of stereoisomers, prodrug, or pharmaceutical composition thereof, and methods of making and using thereof.

IPC Classes  ?

  • C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links

86.

Progranulin variants

      
Application Number 17697771
Grant Number 11643446
Status In Force
Filing Date 2022-03-17
First Publication Date 2022-07-07
Grant Date 2023-05-09
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Cherf, Gerald Maxwell
  • Kannan, Gunasekaran
  • Lexa, Katrina W.
  • Low, Ray L. Y.
  • Prorok, Rachel
  • Srivastava, Ankita

Abstract

Provided herein are progranulin variants and fusion proteins that comprise a progranulin variant and an Fc polypeptide. Methods of using such proteins to treat progranulin-associated disorders (e.g., a neurodegenerative disease, such as frontotemporal dementia (FTD)) are also provided herein.

IPC Classes  ?

  • C07K 14/47 - Peptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from animalsPeptides having more than 20 amino acidsGastrinsSomatostatinsMelanotropinsDerivatives thereof from humans from vertebrates from mammals
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • C07K 14/475 - Growth factorsGrowth regulators
  • A61K 38/00 - Medicinal preparations containing peptides

87.

SOLID FORMS OF A COMPOUND

      
Application Number US2021064069
Publication Number 2022/133236
Status In Force
Filing Date 2021-12-17
Publication Date 2022-06-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Hale, Christopher R. H.
  • Ran, Yingqing
  • Sudhakar, Anantha

Abstract

N-cis-cis-3-(trifluoromethoxy)cyclobutyl]-1,3,4-oxadiazol-2-yl]-1-bicyclo[1.1.1]pentanyl]acetamide, designated herein as Compound I, were prepared and characterized in the solid state. Also provided are processes of manufacture and methods of using the forms of Compound I.

IPC Classes  ?

  • C07C 211/38 - Compounds containing amino groups bound to a carbon skeleton having amino groups bound to carbon atoms of rings other than six-membered aromatic rings of a saturated carbon skeleton containing condensed ring systems
  • C07C 217/52 - Compounds containing amino and etherified hydroxy groups bound to the same carbon skeleton having etherified hydroxy groups or amino groups bound to carbon atoms of rings other than six-membered aromatic rings of the same carbon skeleton
  • C07C 233/05 - Carboxylic acid amides having carbon atoms of carboxamide groups bound to hydrogen atoms or to acyclic carbon atoms having nitrogen atoms of carboxamide groups bound to hydrogen atoms or to carbon atoms of unsubstituted hydrocarbon radicals with carbon atoms of carboxamide groups bound to carbon atoms of an acyclic saturated carbon skeleton having the nitrogen atoms of the carboxamide groups bound to hydrogen atoms or to acyclic carbon atoms

88.

SOLID FORMS OF A COMPOUND

      
Document Number 03205231
Status Pending
Filing Date 2021-12-17
Open to Public Date 2022-06-23
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Hale, Christopher R. H.
  • Ran, Yingqing
  • Sudhakar, Anantha

Abstract

Forms of 2-(4-chlorophenoxy)-N-[3-[5-[cis-3-(trifluoromethoxy)cyclobutyl]-1,3,4-oxadiazol-2-yl]-1-bicyclo[1.1.1]pentanyl]acetamide, designated herein as Compound I, were prepared and characterized in the solid state. Also provided are processes of manufacture and methods of using the forms of Compound I.

IPC Classes  ?

  • A61K 31/4245 - Oxadiazoles
  • A61P 25/00 - Drugs for disorders of the nervous system
  • A61P 25/28 - Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
  • C07D 271/10 - 1,3,4-OxadiazolesHydrogenated 1,3,4-oxadiazoles

89.

FORMULATIONS OF PROTEIN MOLECULES COMPRISING IDURONATE 2-SULFATASE

      
Application Number 17600527
Status Pending
Filing Date 2020-04-03
First Publication Date 2022-06-16
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Andersen, Dana
  • Catherman, Adam
  • Giese, Tina
  • Kannan, Gunasekaran
  • Kariolis, Mihalis
  • Mahon, Cathal
  • Patel, Ankit

Abstract

Certain embodiments provide a pharmaceutical composition comprising: a protein molecule comprising an ERT enzyme-Fc fusion polypeptide and a modified Fc polypeptide; a buffer; an isotonicity agent; a surfactant; and a stabilizer; wherein the pH of the pharmaceutical composition is about 5.5 to 7.0, as well as methods of use thereof.

IPC Classes  ?

  • A61K 38/46 - Hydrolases (3)
  • A61K 47/26 - Carbohydrates, e.g. sugar alcohols, amino sugars, nucleic acids, mono-, di- or oligo-saccharidesDerivatives thereof, e.g. polysorbates, sorbitan fatty acid esters or glycyrrhizin
  • A61K 47/18 - AminesAmidesUreasQuaternary ammonium compoundsAmino acidsOligopeptides having up to five amino acids

90.

Compounds, compositions and methods

      
Application Number 17430570
Grant Number 12091392
Status In Force
Filing Date 2020-02-12
First Publication Date 2022-06-09
Grant Date 2024-09-17
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Feng, Jianwen A.
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to eukaryotic initiation factor 2B modulators, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, and methods of making and using thereof.

IPC Classes  ?

  • C07D 271/113 - 1,3,4-OxadiazolesHydrogenated 1,3,4-oxadiazoles with oxygen, sulfur or nitrogen atoms, directly attached to ring carbon atoms, the nitrogen atoms not forming part of a nitro radical

91.

COMPOUNDS, COMPOSITIONS AND METHODS

      
Application Number 17436297
Status Pending
Filing Date 2020-03-06
First Publication Date 2022-06-09
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Lexa, Katrina W.
  • Osipov, Maksim
  • Sweeney, Zachary K.
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to eukaryotic initiation factor 2B modulators, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, and methods of making and using thereof.

IPC Classes  ?

  • C07D 405/06 - Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
  • C07D 309/14 - Nitrogen atoms not forming part of a nitro radical
  • C07D 405/12 - Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 471/04 - Ortho-condensed systems
  • C07D 405/04 - Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings directly linked by a ring-member-to-ring- member bond

92.

ANTI-TREM2 ANTIBODIES AND METHODS OF USE THEREOF

      
Application Number 17478587
Status Pending
Filing Date 2021-09-17
First Publication Date 2022-06-09
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Dennis, Mark S.
  • Gu, Zhenyu
  • Kariolis, Mihalis
  • Mahon, Cathal
  • Monroe, Kathryn M.
  • Park, Joshua I.
  • Prorok, Rachel
  • Silverman, Adam P.
  • Van Lengerich, Bettina

Abstract

In one aspect, antibodies that specifically bind to a human triggering receptor expressed on myeloid cells 2 (TREM2) protein are provided. In some embodiments, the antibody decreases levels of soluble TREM2 (sTREM2). In some embodiments, the antibody enhances TREM2 activity.

IPC Classes  ?

  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants

93.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Document Number 03202544
Status Pending
Filing Date 2021-11-19
Open to Public Date 2022-05-27
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Hu, Cheng
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Nilewski, Lizanne G.
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

  • A61K 31/444 - Non-condensed pyridinesHydrogenated derivatives thereof containing further heterocyclic ring systems containing a six-membered ring with nitrogen as a ring hetero atom, e.g. amrinone
  • A61K 31/4747 - QuinolinesIsoquinolines spiro-condensed
  • A61K 31/497 - Non-condensed pyrazines containing further heterocyclic rings
  • A61K 31/5025 - PyridazinesHydrogenated pyridazines ortho- or peri-condensed with heterocyclic ring systems
  • A61K 31/506 - PyrimidinesHydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
  • A61P 29/00 - Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agentsNon-steroidal antiinflammatory drugs [NSAID]
  • C07D 221/04 - Ortho- or peri-condensed ring systems
  • C07D 221/06 - Ring systems of three rings
  • C07D 401/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 405/12 - Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 413/12 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 471/04 - Ortho-condensed systems
  • C07D 487/04 - Ortho-condensed systems
  • C07D 498/04 - Ortho-condensed systems

94.

COMPOUNDS, COMPOSITIONS, AND METHODS

      
Application Number US2021060088
Publication Number 2022/109268
Status In Force
Filing Date 2021-11-19
Publication Date 2022-05-27
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Bagdasarian, Alex L.
  • Bucher, Cyril
  • Craig, Ii, Robert A.
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Fox, Brian M.
  • Hu, Cheng
  • Huffman, Benjamin J.
  • Lexa, Katrina W.
  • Nilewski, Lizanne G.
  • Osipov, Maksim
  • Thottumkara, Arun

Abstract

The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of making and intermediates thereof, and methods of using thereof.

IPC Classes  ?

95.

Compounds, compositions, and methods

      
Application Number 17401833
Grant Number 11591316
Status In Force
Filing Date 2021-08-13
First Publication Date 2022-05-05
Grant Date 2023-02-28
Owner Denali Therapeutics Inc. (USA)
Inventor
  • De Vicente Fidalgo, Javier
  • Estrada, Anthony A.
  • Feng, Jianwen A.
  • Lyssikatos, Joseph P.
  • Sweeney, Zachary K.

Abstract

The present disclosure relates generally to LRRK2 inhibitors, or a pharmaceutically acceptable salt, deuterated analog, prodrug, tautomer, stereoisomer, or mixture of stereoisomers thereof, and methods of making and using thereof.

IPC Classes  ?

  • C07D 403/12 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing two hetero rings linked by a chain containing hetero atoms as chain links
  • C07D 401/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing three or more hetero rings
  • C07D 413/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 417/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07D 491/20 - Spiro-condensed systems
  • C07D 498/04 - Ortho-condensed systems
  • C07B 59/00 - Introduction of isotopes of elements into organic compounds
  • C07D 403/14 - Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group containing three or more hetero rings
  • C07D 405/14 - Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing three or more hetero rings
  • C07D 409/14 - Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing three or more hetero rings
  • C07D 487/04 - Ortho-condensed systems

96.

METHODS FOR TREATING AND MONITORING FRONTOTEMPORAL DEMENTIA

      
Document Number 03198606
Status Pending
Filing Date 2021-10-13
Open to Public Date 2022-04-21
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Astarita, Giuseppe
  • Devos, Sarah L.
  • Di Paolo, Gilbert
  • Fang, Meng
  • Huang, Fen
  • Logan, Todd P.
  • Simon, Matthew J.

Abstract

The present disclosure provides methods and materials for screening a compound or monitoring a subject's response to a compound or dosing regimen for treating frontotemporal dementia (FTD). Methods and materials for identifying and treating a subject having FTD are also provided.

IPC Classes  ?

  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids

97.

Anti-TREM2 antibodies and methods of use thereof

      
Application Number 17402986
Grant Number 12240902
Status In Force
Filing Date 2021-08-16
First Publication Date 2022-04-21
Grant Date 2025-03-04
Owner Denali Therapeutics Inc. (USA)
Inventor
  • Dennis, Mark S.
  • Duncan, Sherie
  • Lisaingo, Kathleen
  • Monroe, Kathryn M.
  • Park, Joshua I.
  • Prorok, Rachel
  • Shi, Ju
  • Srivastava, Ankita
  • Van Lengerich, Bettina
  • Walsh, Riley

Abstract

In one aspect, antibodies that specifically bind to a human triggering receptor expressed on myeloid cells 2 (TREM2) protein are provided. In some embodiments, the antibody decreases levels of soluble TREM2 (sTREM2). In some embodiments, the antibody enhances TREM2 activity.

IPC Classes  ?

  • A61K 39/00 - Medicinal preparations containing antigens or antibodies
  • C07K 16/28 - Immunoglobulins, e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants

98.

METHODS FOR TREATING AND MONITORING FRONTOTEMPORAL DEMENTIA

      
Application Number US2021071835
Publication Number 2022/082178
Status In Force
Filing Date 2021-10-13
Publication Date 2022-04-21
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Astarita, Giuseppe
  • Devos, Sarah L.
  • Di Paolo, Gilbert
  • Fang, Meng
  • Huang, Fen
  • Logan, Todd P.
  • Simon, Matthew J.

Abstract

The present disclosure provides methods and materials for screening a compound or monitoring a subject's response to a compound or dosing regimen for treating frontotemporal dementia (FTD). Methods and materials for identifying and treating a subject having FTD are also provided.

IPC Classes  ?

  • G01N 33/68 - Chemical analysis of biological material, e.g. blood, urineTesting involving biospecific ligand binding methodsImmunological testing involving proteins, peptides or amino acids

99.

FUSION PROTEINS COMPRISING SULFOGLUCOSAMINE SULFOHYDROLASE ENZYMES AND METHODS THEREOF

      
Document Number 03197506
Status Pending
Filing Date 2021-10-13
Open to Public Date 2022-04-21
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Giese, Tina
  • Kannan, Gunasekaran
  • Kariolis, Mihalis
  • Mahon, Cathal

Abstract

Provided herein are proteins, which are capable of being transported across the blood-brain barrier (BBB) and comprise sulfoglucosamine sulfohydrolase (SGSH) enzyme-Fc fusion polypeptides. Certain embodiments also provide methods of using such proteins to treat Sanfibppo syndrome A.

IPC Classes  ?

  • A61K 38/46 - Hydrolases (3)
  • A61K 47/68 - Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additivesTargeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
  • A61P 3/00 - Drugs for disorders of the metabolism
  • C12N 9/14 - Hydrolases (3.)
  • C12N 15/62 - DNA sequences coding for fusion proteins

100.

FUSION PROTEINS COMPRISING SULFOGLUCOSAMINE SULFOHYDROLASE ENZYMES AND METHODS THEREOF

      
Application Number US2021054860
Publication Number 2022/081765
Status In Force
Filing Date 2021-10-13
Publication Date 2022-04-21
Owner DENALI THERAPEUTICS INC. (USA)
Inventor
  • Giese, Tina
  • Kannan, Gunasekaran
  • Kariolis, Mihalis
  • Mahon, Cathal

Abstract

Provided herein are proteins, which are capable of being transported across the blood-brain barrier (BBB) and comprise sulfoglucosamine sulfohydrolase (SGSH) enzyme-Fc fusion polypeptides. Certain embodiments also provide methods of using such proteins to treat Sanfibppo syndrome A.

IPC Classes  ?

  • C12N 9/14 - Hydrolases (3.)
  • A61K 38/46 - Hydrolases (3)
  • A61K 47/68 - Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additivesTargeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
  • A61P 3/00 - Drugs for disorders of the metabolism
  • C12N 15/62 - DNA sequences coding for fusion proteins
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