Aspects discussed herein relate to employing deep learning to automate mapping and transformation of a source data set to a target data schema. A system may utilize deep learning algorithms to determine a mapping from the source schema to the target schema through identifying the source schema and creating a correspondence between source fields and target fields, and a corresponding data transformation. Artificial neural networks, configured as schema-level and instance-level classifiers, may generate a set of predictions based on the fields of the source data set and fields of the target data schema. These predictions may be combined with other predictions based on other criteria (such as similarity between the fields) to generate a complete prediction of a schema mapping. Similarly, deep learning techniques may be employed to determine an appropriate data transformation to transform source data content to an appropriate format for corresponding fields of the target schema.
Described herein are systems, methods, and apparatus for electronically drawing and editing representations of chemical structures using an intuitive user interface. This user interface, the context-aware virtual keyboard, makes it faster and easier to draw and edit chemical structure representations by guiding the user through the sequence of steps required to produce the representation in a context-based, non-linear fashion. The context-based virtual keyboard allows a user to quickly create graphical representations of complex chemical structures by using the structure itself as a basis for presenting efficient options for subsequent drawing/editing steps. Different possible and/or likely actions (e.g., edits to a chemical structure being drawn) are presented to the user based on a selected navigation position on the drawing. Thus, a user can efficiently and intuitively modify a chemical structure drawing without the tedious manual selection of portions of the chemical structure and without searching through complicated menus.
Described herein are systems and methods that efficiently search for documents related to chemical structures of interest to a user. In certain embodiments, text data and chemical structure data provided in a user query are simultaneously searched with a text-based search method to efficiently produce search results. Subsequent structure-based searching on the results of the text-based search produces precise results for a particular user query. This approach increases the speed of the structure-based search by reducing the amount of data the structure-based search searches over. Additionally described herein are systems and methods for indexing document data in order to facilitate this efficient searching.
Described herein are systems and methods that efficiently search for documents related to chemical structures of interest to a user. In certain embodiments, text data and chemical structure data provided in a user query are simultaneously searched with a text-based search method to efficiently produce search results. Subsequent structure-based searching on the results of the text-based search produces precise results for a particular user query. This approach increases the speed of the structure-based search by reducing the amount of data the structure-based search searches over. Additionally described herein are systems and methods for indexing document data in order to facilitate this efficient searching.
G06F 19/00 - Équipement ou méthodes de traitement de données ou de calcul numérique, spécialement adaptés à des applications spécifiques (spécialement adaptés à des fonctions spécifiques G06F 17/00;systèmes ou méthodes de traitement de données spécialement adaptés à des fins administratives, commerciales, financières, de gestion, de surveillance ou de prévision G06Q;informatique médicale G16H)
G06F 17/30 - Recherche documentaire; Structures de bases de données à cet effet
Presented herein are systems, methods, and architectures related to a scalable and platform-agnostic framework that leverages multiple pluggable connectors to retrieve clinical trial data from different data sources (e.g. corresponding to different systems used to collect and manage data collected over the course of a clinical trial). The clinical connector technology described herein transforms the retrieved data to one or more standardized representations using one or more pre-defined data models. By providing clinical trial data to the client applications of stakeholders in one or more standardized formats (e.g. represented according to a standardize pre-defined data model), irrespective of the source of the clinical trial data, the systems, methods, and architectures described herein obviate the need for stakeholders to modify their workflow depending on the particular source.
G06F 19/00 - Équipement ou méthodes de traitement de données ou de calcul numérique, spécialement adaptés à des applications spécifiques (spécialement adaptés à des fonctions spécifiques G06F 17/00;systèmes ou méthodes de traitement de données spécialement adaptés à des fins administratives, commerciales, financières, de gestion, de surveillance ou de prévision G06Q;informatique médicale G16H)
6.
SYSTEMS AND METHODS EMPLOYING MERGE TECHNOLOGY FOR THE CLINICAL DOMAIN
Presented herein are systems and methods for merging and manipulating data from different sources of clinical trial data. Clinical trial data is collected using multiple different forms and can be from either a single clinical trial or from multiple clinical trials. In certain embodiments, the systems and methods described herein are provided in the form of an intuitive graphical user interface (GUI) that enables a user to merge and manipulate data from 10 two or more source tables of clinical trial data associated with one or more clinical studies to produce a custom merged table, without having to rely upon complex computer code.
G06F 17/30 - Recherche documentaire; Structures de bases de données à cet effet
G06F 19/00 - Équipement ou méthodes de traitement de données ou de calcul numérique, spécialement adaptés à des applications spécifiques (spécialement adaptés à des fonctions spécifiques G06F 17/00;systèmes ou méthodes de traitement de données spécialement adaptés à des fins administratives, commerciales, financières, de gestion, de surveillance ou de prévision G06Q;informatique médicale G16H)
Presented herein are systems and methods to automatically and periodically retrieve clinical trial data from an EDC source, process the data to transform it from its initial representation as retrieved from the EDC source into table-based format, and store the resultant transformed data in an intermediate data storage layer for access by stakeholders. Accordingly, instead of accessing source data, such as EDC ODM-XML data directly from an EDC source, a stakeholder may retrieve clinical trial data from the transformed data stored in the data storage layer. The systems and methods provide transformed data that better serves the needs of stakeholders during a clinical trial
G06F 19/00 - Équipement ou méthodes de traitement de données ou de calcul numérique, spécialement adaptés à des applications spécifiques (spécialement adaptés à des fonctions spécifiques G06F 17/00;systèmes ou méthodes de traitement de données spécialement adaptés à des fins administratives, commerciales, financières, de gestion, de surveillance ou de prévision G06Q;informatique médicale G16H)
8.
SYSTEM AND METHOD FOR UPLOADING AND MANAGEMENT OF CONTRACT-RESEARCH-ORGANIZATION DATA TO A SPONSOR COMPANY'S ELECTRONIC LABORATORY NOTEBOOK
The present disclosure provides a system and method for comprehensive data synchronization management between a sponsor-company's central electronic-laboratory-notebook system and either multiple contract-research-organizations or research sites. The system features a data loader server that can be deployed on-premise or in the cloud and allows scheduling of synchronization jobs of electronic-laboratory-notebook. The data loader software communicates to the contract research organization and the sponsor company's electronic laboratory notebook and executes scheduled or on-demand jobs. The data loader software may synchronized subsequent update of the data and may automatically delete the data from the contract research organization's site once a given transfer is complete. In some implementations, the method and system is configured for automation, scalability, and high-performance operations that focused on efficiency, security, configurability, and privacy/intellectual property protection.
G06F 16/27 - Réplication, distribution ou synchronisation de données entre bases de données ou dans un système de bases de données distribuéesArchitectures de systèmes de bases de données distribuées à cet effet
G16H 10/40 - TIC spécialement adaptées au maniement ou au traitement des données médicales ou de soins de santé relatives aux patients pour des données relatives aux analyses de laboratoire, p. ex. pour des analyses d’échantillon de patient
G16H 40/20 - TIC spécialement adaptées à la gestion ou à l’administration de ressources ou d’établissements de santéTIC spécialement adaptées à la gestion ou au fonctionnement d’équipement ou de dispositifs médicaux pour la gestion ou l’administration de ressources ou d’établissements de soins de santé, p. ex. pour la gestion du personnel hospitalier ou de salles d’opération
9.
SYSTEM AND METHOD FOR UPLOADING AND MANAGEMENT OF CONTRACT-RESEARCH-ORGANIZATION DATA TO A SPONSOR COMPANY'S ELECTRONIC LABORATORY NOTEBOOK
The present disclosure provides a system and method for comprehensive data synchronization management between a sponsor-company's central electronic-laboratory-notebook system and either multiple contract-research-organizations or research sites. The system features a data loader server that can be deployed on-premise or in the cloud and allows scheduling of synchronization jobs of electronic-laboratory-notebook. The data loader software communicates to the contract research organization and the sponsor company's electronic laboratory notebook and executes scheduled or on-demand jobs. The data loader software may synchronized subsequent update of the data and may automatically delete the data from the contract research organization's site once a given transfer is complete. In some implementations, the method and system is configured for automation, scalability, and high-performance operations that focused on efficiency, security, configurability, and privacy/intellectual property protection.
G06F 19/00 - Équipement ou méthodes de traitement de données ou de calcul numérique, spécialement adaptés à des applications spécifiques (spécialement adaptés à des fonctions spécifiques G06F 17/00;systèmes ou méthodes de traitement de données spécialement adaptés à des fins administratives, commerciales, financières, de gestion, de surveillance ou de prévision G06Q;informatique médicale G16H)
G06F 17/30 - Recherche documentaire; Structures de bases de données à cet effet
10.
SYSTEMS AND METHODS FOR PROVIDING FEEDBACK CUES FOR TOUCH SCREEN INTERFACE INTERACTION WITH CHEMICAL AND BIOLOGICAL STRUCTURE DRAWING APPLICATIONS
Creating a graphical representation of at least one of a chemical structure and a biological structure using a touch screen interface may include identifying connection location(s) of an in-progress structure and connection location(s) of a separate structure element, determine, upon receipt of a gesture input moving the structure element towards the in-progress structure, that a distance between a first connection location of the in-progress structure and a first connection location of the structure element signals an intended connection of the structure element to the in-progress structure at or about the corresponding connection locations, analyze a resultant structure formed by connection of the in-progress structure and the structure element at or about the corresponding connection locations to determine a response, and provide a visible cue, an audible cue, and/or a haptic cue corresponding to the response.
G06F 19/00 - Équipement ou méthodes de traitement de données ou de calcul numérique, spécialement adaptés à des applications spécifiques (spécialement adaptés à des fonctions spécifiques G06F 17/00;systèmes ou méthodes de traitement de données spécialement adaptés à des fins administratives, commerciales, financières, de gestion, de surveillance ou de prévision G06Q;informatique médicale G16H)
G06F 19/26 - pour la visualisation de données, p.ex. production de graphiques, affichage de cartes ou de réseaux ou autres représentations visuelles
G06F 3/0488 - Techniques d’interaction fondées sur les interfaces utilisateur graphiques [GUI] utilisant des caractéristiques spécifiques fournies par le périphérique d’entrée, p. ex. des fonctions commandées par la rotation d’une souris à deux capteurs, ou par la nature du périphérique d’entrée, p. ex. des gestes en fonction de la pression exercée enregistrée par une tablette numérique utilisant un écran tactile ou une tablette numérique, p. ex. entrée de commandes par des tracés gestuels
G06F 3/01 - Dispositions d'entrée ou dispositions d'entrée et de sortie combinées pour l'interaction entre l'utilisateur et le calculateur
11.
SYSTEMS AND METHODS FOR GESTURE-BASED SHARING OF DATA BETWEEN SEPARATE ELECTRONIC DEVICES
Described herein are various embodiments of systems, methods, and apparatus that allow a user to share data, such as one or more files from within an application with one or more other (not necessarily co-located) computing devices using a gesture-based sharing function. In a particular example, systems, methods, and apparatus described herein may be used to share graphical representations of chemical structures within a chemical structure rendering application between two or more user devices. By offering a user a quick and visually intuitive option for sharing a file with other user(s) without exiting a current application, the systems, methods, and apparatus described herein provide efficient and engaging tools for sharing work product in real time between two or more users.
G06F 17/30 - Recherche documentaire; Structures de bases de données à cet effet
G06F 3/01 - Dispositions d'entrée ou dispositions d'entrée et de sortie combinées pour l'interaction entre l'utilisateur et le calculateur
G06F 3/0488 - Techniques d’interaction fondées sur les interfaces utilisateur graphiques [GUI] utilisant des caractéristiques spécifiques fournies par le périphérique d’entrée, p. ex. des fonctions commandées par la rotation d’une souris à deux capteurs, ou par la nature du périphérique d’entrée, p. ex. des gestes en fonction de la pression exercée enregistrée par une tablette numérique utilisant un écran tactile ou une tablette numérique, p. ex. entrée de commandes par des tracés gestuels
12.
VISUALLY AUGMENTING A GRAPHICAL RENDERING OF A CHEMICAL STRUCTURE REPRESENTATION OR BIOLOGICAL SEQUENCE REPRESENTATION WITH MULTI-DIMENSIONAL INFORMATION
In certain embodiments, the invention relates to systems, methods, and apparatus that allow a user to visually augment a graphical rendering of either a chemical structure representation or a biological sequence representation with multi-dimensional information. A user captures a video image using a computing device such as a hand-held smart phone, computerized eye glasses or tablet computer. The video image includes information regarding at least one of a chemical structure and a biological sequence. A processor identifies, within the video image, a graphical representation of at least one of a chemical structure and a biological structure. The processor augments the graphical representation with additional information and provides the video data for presentation upon a display controlled by the computing device. The computing device presents the video data in substantially real time in relation to the capture of the video data by the computing device.
G06F 19/00 - Équipement ou méthodes de traitement de données ou de calcul numérique, spécialement adaptés à des applications spécifiques (spécialement adaptés à des fonctions spécifiques G06F 17/00;systèmes ou méthodes de traitement de données spécialement adaptés à des fins administratives, commerciales, financières, de gestion, de surveillance ou de prévision G06Q;informatique médicale G16H)
G06K 9/00 - Méthodes ou dispositions pour la lecture ou la reconnaissance de caractères imprimés ou écrits ou pour la reconnaissance de formes, p.ex. d'empreintes digitales
13.
SYSTEMS, METHODS, AND APPARATUS FOR DRAWING CHEMICAL STRUCTURES USING TOUCH AND GESTURES
Systems, methods, and apparatus are provided that allow a user to draw and edit a chemical structure using one or more gestures performed on an input interface, such as a touch pad or touch screen. For example, the user may assign an atom label to a chemical structure representation by performing a press and tap gesture, change a chemical bond characteristic in the chemical structure representation by performing a tap gesture, and/or lengthen a molecular chain in the chemical structure representation by performing a drag gesture. The user may also rotate the chemical structure representation in the graphical display by performing one or more rotation gestures.
G16C 20/00 - Chémo-informatique, c.-à-d. TIC spécialement adaptées au maniement des données physicochimiques ou structurelles des particules, des éléments, des composés ou des mélanges chimiques
Abstract Systems, methods, and apparatus are provided that allow a user to draw and edit a chemical structure using one or more gestures performed on an input interface, such as a touch pad or touch screen. For example, the user may assign an atom label to a chemical structure representation by performing a press and tap gesture, change a chemical bond characteristic in the chemical structure representation by performing a tap gesture, and/or lengthen a molecular chain in the chemical structure representation by performing a drag gesture. The user may also rotate the chemical structure representation in the graphical display by performing one or more rotation gestures. Date Recue/Date Received 2020-09-04
G16C 20/00 - Chémo-informatique, c.-à-d. TIC spécialement adaptées au maniement des données physicochimiques ou structurelles des particules, des éléments, des composés ou des mélanges chimiques
In various embodiments, multiple heterogeneous documents are processed to identify structures, such as chemical structures, contained therein, including non-embedded structures. Also described is a graphical user interface that permits a user to search for a structure or substructure within a set of electronic documents, then displays the matching structures as well as the actual pages of the documents on which the matching structures are found. Display of the actual pages allows the user to verify the matches and provides helpful context for the user.
G16C 20/00 - Chémo-informatique, c.-à-d. TIC spécialement adaptées au maniement des données physicochimiques ou structurelles des particules, des éléments, des composés ou des mélanges chimiques
G16C 20/40 - Recherche de structures chimiques ou de données physicochimiques
G16C 20/90 - Langages de programmationArchitectures informatiquesSystèmes de bases de donnéesStockage de données
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